Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0510 ATGAACTCATCGTTTCCTTCAATGGAGCTTATGAAACTCTTATTGATTGTGCTTTCTATTTTATGCAACATAAAAACTCTGAACGCTGATGGACTTCTTGTGTATGACTACTACAAGGAGACGTGCCCCTTGGCTGAAGATATTGTGAGACACAACGTGGAGGTTGCAGTGTTCAGAGATCCTCGTTTGGCAGCCTCTTTACTTCGCTTGCATTTCCATGATTGCTTTGTCATGGGGTGTGATGCATCGCTACTTCTGGACAGCGTTGAGGGCATGACTAGCGAAAAGCAGGCAGTACCAAATCTGAATTCATTACGGGGATTTGAGGTTATAGACAAGATAAAGTATTTACTGGAAGAGGAATGTCCTCTCACGGTTTCTTGTGCTGATATTCTTGCCATGGTTGCTCGAGATGCAGTTGAACTGAGAGGAGGGCCACGATGGGAAGTATTGCTGGGGAGGAAGGATTCTCTCGAGTCAAGCTATAGTGGAGCTAACCAGTTCATCCCCGCTCCAAATTCATCTTTGGAGATTCTCATAGACAAATTTAAAAAGCAAGGCCTAGACATAGAAGACTTGGTAGCTCTATCAGGTAGCCACACCATAGGAAGGGCAAGATGTTTAAGCTTCCGACAGAGGGTCTATGATGCTAAACCTGAATATCATTATGAATATGACCGTTACAAGCGGTATACAACCTTCAGAAGAATCCTAAGGTCCATATGCCCTGTTTCGGGAAGGGATGACAAATTTGCTCCTCTGGATTTTGAAACCCCAGCCAAGTTTGATAATCACTACTTCATAAACATCCTCGAAGGAAATGGATTATTGGGTTCAGATAATGTCTTGATAAGCGAGGACTATGAGGGAGTGATTACAGATAAAGTGTGGGCTTATGCCTCAAACCAAGAGCACTTCTTCGCTACATTTGCTAAATCGATGATCAAGATGGGAAATATCGGCGTCCTCACGGGAAACGAAGGAGAAATCAGGAGGAATTGTAGGTTTGTCAATATTTAA 1020 0.4314 MNSSFPSMELMKLLLIVLSILCNIKTLNADGLLVYDYYKETCPLAEDIVRHNVEVAVFRDPRLAASLLRLHFHDCFVMGCDASLLLDSVEGMTSEKQAVPNLNSLRGFEVIDKIKYLLEEECPLTVSCADILAMVARDAVELRGGPRWEVLLGRKDSLESSYSGANQFIPAPNSSLEILIDKFKKQGLDIEDLVALSGSHTIGRARCLSFRQRVYDAKPEYHYEYDRYKRYTTFRRILRSICPVSGRDDKFAPLDFETPAKFDNHYFINILEGNGLLGSDNVLISEDYEGVITDKVWAYASNQEHFFATFAKSMIKMGNIGVLTGNEGEIRRNCRFVNI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0510 339 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 FunFam Peroxidase 36 176 - -
Dere09g0510 339 Pfam Peroxidase 50 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 FunFam Peroxidase 170 317 - -
Dere09g0510 339 SUPERFAMILY Heme-dependent peroxidases 33 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Dere09g0510 339 Gene3D Peroxidase, domain 2 170 317 - -
Dere09g0510 339 Gene3D - 36 338 - -
Dere09g0510 339 PANTHER PEROXIDASE 72-RELATED 33 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Dere09g0510 339 ProSiteProfiles Plant heme peroxidase family profile. 32 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g0510 339 CDD secretory_peroxidase 33 337 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0510 Dere-ChrDere09 7986852 7988602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0510 92 339 Peroxidase AT2G35380 69.355 8.81e-128 364