Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0469 ATGGGTGGTTCCTCTGTCTGTAGACAACTTTACCTGCTTTTTAATAGTCTCTTTTGTTTTGTTTATGCTTCCTGCTTTGATCCTTTCTTAGGCTTGCGTATTGTGCGGTCTTCGGAGGCGCTTGTGAGGGTGGACATGGAGGAACGGTACGAGCCATTGAAGGAACTTGGTGCGGGCAATTTTGGAGTGGCCAGGTTGGTCAGAGATAAGAAGACGAAAGAGCTTGTTGCTGTCAAGTACATAGAAAGGGGGAAAAAGATTGACGAGAAAGTTCAGAGGGAGATAATTAACCATCGATCTTTGAGGCATCCAAACATCATCAAGTTTAAAGAGGTCTTGCTGACCCCTACTCATCTAGCTATTGTCATGGAGTATGCTGCAGGTGGTGAACTCTTTGAGAGAATATGCAATGCTGGTCGATTTAGTGAAGATGAGGCGAGATTTTTCTTCCAGCAGCTAATATCTGGGGTTAGCTACTGTCACTCAATGCAAATTTGTCACAGAGATCTGAAATTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTTAAAATATGTGACTTTGGTTACTCCAAGTCGGCTTTGCTGCACTCTCAACCAAAATCAACTGTTGGAACTCCTGCTTACATTGCTCCTGAGGTTCTGTCTCGAAAGGGGTATGATGGAAAGATTGCGGACGTTTGGTCCTGTGGTGTAACACTGTACGTCATGTTAGTTGGAGGATACCCTTTTGAAGATCCTGAAGATCCCAGGAATTTCCGAAAGACCATTGGAAGAATATTGAGTGTTCAATACTCCATACCTGAATATGTACGTGTCTCTGCAGACTGCAGACATCTTCTTTCTCGCATCTTTGTAGCCAATCCTGCTGAGAGGATAACGATCCCCGAGATAAAACAGAACCCCTGGTTTTTGAAGAACTTGCCTAAAGAGATAGTTGAAGCTGAGAAGAAGAACTACGAGGAAGCACAGAAAGATCAACCCAGCCAGAGTGTTGAAGAAATAATGCGAATCGTACAGGAGGCCATGACACCGGGGCAAGCATCCAAGGGTGGAGGACAAGCTGGTGGAGGAGGATCATCGGACGGTGAGGATGTTGAGGATGATGATGAGGAGTCGGTAGTTGAAGCTAGCGGTGACTATGCCACTCCATAG 1161 0.4539 MGGSSVCRQLYLLFNSLFCFVYASCFDPFLGLRIVRSSEALVRVDMEERYEPLKELGAGNFGVARLVRDKKTKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKGYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRILSVQYSIPEYVRVSADCRHLLSRIFVANPAERITIPEIKQNPWFLKNLPKEIVEAEKKNYEEAQKDQPSQSVEEIMRIVQEAMTPGQASKGGGQAGGGGSSDGEDVEDDDEESVVEASGDYATP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0469 386 Gene3D Phosphorylase Kinase; domain 1 34 125 - -
Dere09g0469 386 Gene3D Transferase(Phosphotransferase) domain 1 126 313 - -
Dere09g0469 386 MobiDBLite consensus disorder prediction 322 386 - -
Dere09g0469 386 FunFam Serine/threonine-protein kinase SRK2E 45 125 - -
Dere09g0469 386 SMART serkin_6 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0469 386 MobiDBLite consensus disorder prediction 364 378 - -
Dere09g0469 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Dere09g0469 386 FunFam Serine/threonine-protein kinase SRK2E 126 314 - -
Dere09g0469 386 ProSiteProfiles Protein kinase domain profile. 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0469 386 Pfam Protein kinase domain 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0469 386 SUPERFAMILY Protein kinase-like (PK-like) 41 315 IPR011009 -
Dere09g0469 386 CDD STKc_SnRK2 49 305 - -
Dere09g0469 386 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Dere09g0469 386 PANTHER SERINE/THREONINE KINASE 48 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0469 Dere-ChrDere09 7539342 7542312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0469 49 332 CBL-interacting serine-threonine protein kinases AT4G24400 42.034 2.91e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dere09g0469 Pkinase 1.7e-70 CL0016