Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0468 ATGGGTCGTAAACCTAACGAACCGGAGCCCACTCTTCCTAGCCGTTTGATCCTCCTTTTGGTGTGCTTGGTTCCATGCGCTTTGGTCTATGCCTTCGTCTCTACAGTGCTCACCACCACAAGGATCTCTTCAGTTTCTGAGTTTGGGTCGTTGGTTGAAGATGGTGAAGCAATGGACAATTCTGGGGGAGATAATAGAGGATGCTGTAGAGGAATTGAAAACTTGGAACTGTGGGGAGCCGCTGTAAAGTGGGGTTCTGAGTTTAAATTTAATAATTCCAAAGATTGCTGCAACGCTTGTAAATCCATGTGTACTGGAAAGGATGGGCCGTGTCTCTGTGATACGTGGGTGTTTTGTGGGAACCGTGAGACTTGTGGATCCAAGTTTGGCGAGTGCTGGTTGAAGAAACAAAAGGACAGCTTAGTCCCTGAACGACAAGAAGCAGGGAAAGCAGTTAGTTGGACTTCTGGTCTCATCTTTGGAAAAGGAGAGGGTATTGTTGAGCTGGAAACAGAATACGGAACTCTTCGTGTAAAACTTTTCCCTGACTGTGCTCCACACTCAGTTGCCTATATTCTTGAGTTTTTGGCTTTGCGCCATTGTGCAGGCTGCCAATTTTATCGTGCAGAAAGCCGAGGCCAATCATGGGATTCAGAAGGAAACCACATAAAAAATGCTCCTTTTGGTCCCCCTTTCGGATTAATTCAAGGTACATTGGAGGCACAGGGAAACCCATTTAAGAAAATTCCAGTAGAAGATTGTCCAACTATAAGAAGGGGTTCAGTTGCTTGGATTGATTCAGGACCAGAATTCTTCATAAGCCTTGCTAACCATGGGGAGTGGAAAAAAGCATACACAGTTTTCGGTTCTGTTCTTCCAGAAGACATGAGTATAGCCGAGAAAATTGCTGCACTCCCCGCAGTGTCTGATGTTTGGAACAATATCAACGTTTCTGTTTTGGAAAAACCCATTCCCTTGTCGCTACGAAGAATCCAGAAAAACCATGCAGATATTAACACCAATGCAAAATCAGATTAG 1038 0.447 MGRKPNEPEPTLPSRLILLLVCLVPCALVYAFVSTVLTTTRISSVSEFGSLVEDGEAMDNSGGDNRGCCRGIENLELWGAAVKWGSEFKFNNSKDCCNACKSMCTGKDGPCLCDTWVFCGNRETCGSKFGECWLKKQKDSLVPERQEAGKAVSWTSGLIFGKGEGIVELETEYGTLRVKLFPDCAPHSVAYILEFLALRHCAGCQFYRAESRGQSWDSEGNHIKNAPFGPPFGLIQGTLEAQGNPFKKIPVEDCPTIRRGSVAWIDSGPEFFISLANHGEWKKAYTVFGSVLPEDMSIAEKIAALPAVSDVWNNINVSVLEKPIPLSLRRIQKNHADINTNAKSD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0468 345 PANTHER EXPRESSED PROTEIN 1 335 - -
Dere09g0468 345 FunFam Predicted protein 162 325 - -
Dere09g0468 345 Gene3D - 160 322 IPR029000 -
Dere09g0468 345 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 309 IPR002130 GO:0000413|GO:0003755
Dere09g0468 345 SUPERFAMILY Cyclophilin-like 162 313 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0468 Dere-ChrDere09 7534494 7537024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0468 162 292 U-box Gene Family AT5G67530 26.812 9.53e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0468 09 7534494 7537024 Dere09g0468 09 7534494 7537024 ECH