Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0455 ATGGAACTTCATTCGAAACACCAACTTGGCCTTGTTTGCGTGATGCTGCTCTTACCTACACTATGTACCTCCCAAGTCTTTAAGTCCTCCAGAGCAACCTATTATGGTAGCCCGGATTACTATGGAAATCCAAGGGGAGCTTGTGGATATGGCGAATATGGAAGGACTGCGAACGATGGGAGCGTTGCAGCCGTTTCTGGGCTATGGAGGGGTGGATCTGGATGTGGTGCTTGCTACCAAGTAAGGTGCAAGAATCCACAATACTGCGATGAGTATGGCTCATTCGTAGTGGCAACAGACTACGGTGAAGGAGACACAACAGACTTCATAATGAGTCCACTTGGCTACTCCAGACTGGGAGTCAATGCAGATGCTTCCGCAGAGCTCTCCAAATGCGGCGTCGTTGATGTGGAATTTAGAAGGGTGCCCTGCACTTATGCAGGCTATAACACCGTCATCAAGGTCCACGAGCATAGCAAATACCCTGACTACCTTGCTATCGCCATTCTCTACTTGCCTGGACAATACGAGGTCGCTGCTGTAGAGATTTTGCAGGATGATCTCCAATGGAGGCCAATGCGCAGAGCCTTTGGGGCTGTGTTTGACACACTGAACGCACCACGTGCAAGAATTGTTGTGAAGTTGCAACTGATTGGGACAGCAGGGGCTTATTGGGTGCAGTCCAAGAAAGCTATTCCCAGTGATTGGAAGGTTGGAGCTACTTATGACACCGAAATTCAGCTAGATTAA 750 0.4907 MELHSKHQLGLVCVMLLLPTLCTSQVFKSSRATYYGSPDYYGNPRGACGYGEYGRTANDGSVAAVSGLWRGGSGCGACYQVRCKNPQYCDEYGSFVVATDYGEGDTTDFIMSPLGYSRLGVNADASAELSKCGVVDVEFRRVPCTYAGYNTVIKVHEHSKYPDYLAIAILYLPGQYEVAAVEILQDDLQWRPMRRAFGAVFDTLNAPRARIVVKLQLIGTAGAYWVQSKKAIPSDWKVGATYDTEIQLD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0455 249 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Dere09g0455 249 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Dere09g0455 249 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Dere09g0455 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Dere09g0455 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Dere09g0455 249 Pfam Expansin C-terminal domain 153 233 IPR007117 -
Dere09g0455 249 CDD DPBB_EXLB_N 29 144 - -
Dere09g0455 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 244 IPR007117 -
Dere09g0455 249 PANTHER EXPANSIN-B3 16 247 - -
Dere09g0455 249 SUPERFAMILY PHL pollen allergen 152 243 IPR036749 -
Dere09g0455 249 Gene3D - 145 245 IPR036749 -
Dere09g0455 249 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Dere09g0455 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Dere09g0455 249 Gene3D - 19 144 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0455 Dere-ChrDere09 7385441 7386996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0455 9 248 Expansin Gene Family AT4G17030 55.372 1.77e-91 268