Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0454 ATGAAATGCGGAGCGATCATTTCCATAGTTTTGTATGCAATTGCTGCACAAGAAAAGAGGGGTCAGTTACAGTTTGTAGGTTCGTGTGCTTCGTTCCCGGTTTACTTTCTTCCCTCTGCGTTCTGCCATTGCTGTGAGAACCGCGATTCTGGTGATACTGATAGTCCACTAAATCAGAATTCGGGTGGCTTGGCGAGCTATCAGGTTCAGGGGTTGTATTCAAGGTTATCAGATAAGAATATTGGCCGTCAAAGCTTCAGTGTGTACATCGTTACACATGGTTTTGGATTGATGATGGGGTTTGTGGAGAATATGTTGCATTCAAAGTCATTAACTAGGGTTGGTTCAGTCAATAGCAGTAATAATGAGGGAAGATCTGGGAATCCACGGATGGAAAATGGGAATTGCATCCTTCTTACTCAGCTCATGTATAAACGGCGGAAAGTGTCCGCCATTCGTGATTATCCGGAAGGTTGTGGACCGCTTGTGCCTAGAATTGATTTAACTTCAAATGTAGATACTGCTAGCTTTGGTTTTTGTAAAGGTACATTTGTTGAGGATAAGAGTGGTGAATATTTAAAGGATGAATTTGTTAGAACTTCCAAGCTTGAAAATGAGCCCCGACATTCTGTGTTTTTGCAGAGTTCATGTCCCACTGAGACTCTTGGACAAACAAATGAATCTATTCTGGGGAAGGAAACTTCGGTAGTCTCATCAAAAATTGTGGATAAGCCTCCTTTGACAAATGATGAAACTGTAAAATTGAAGTTGGTGGGCTTGGAAAATTTGGAGGATTTGGAGTTGAAAAGAACTGCAGAAGCTGTAAAATGTGATGATTCATCTAATAAGCCAATAAACTTTCACAAAATTGGCCCTTCTCCAGAGGGTGAGGTGGTTTTCTCAGGTAGTAAATTCTTATCACCAGATGCCAGTATAGCTGGTTCTAGTGCTTGTTGGGAGAAGGCTATAACTAGAAGGCGTTTTCCTCAAAGACGAGTTTCAGCCATCAGAGACTTTCCTCCTTTATGCGGACAAAATGCTCCACAACTTAGTAAGGATGAGTGTTTAGAGGGGATCTCTTTTTTGGATAACAAGAGTACAGATCACCAAAACTTGGCTATAGATGACAAGGAACTGAAAAAGGTCACAGCTTCTGATGTAGAAGAAGTGGAAAATAATGTTAAAAGTGGAGATGCTTGCAATTCAGTGGGCATAATTCGAGCTGATTTTGATAGAAATGCCACACGGGAAGTTAATAAGCTGGATGGATTTGGACCACCTTCTGAGATGAAATTGCCACCTGAAAATACAAGAGATAAGGGCATTGCAGTTCCTGATGAAAGCAATGACCATCCGGTACTAATAAATCCCTTGACAGTGGTTAAAGAAGAAAGTAGTGATGCTGTACAGATCGAGGGAACATCAGGGATGGAGATAATAGTTTATTCAGGAGCCCAAAGTCCTGTGACAAAGCCTATGGGCATATCTGGTCGCCATCATAAGTTCAAAGGAAATTTCAATGAATTGCAGGTTTCATCTGGCAGCATAACTGTGCTAGGACTGATGGCTGAATCGGAATGTCCTTGGAGAAAAGGTAAAGATGCTTCCAGATTTGGTATGATTGGTGGTACAAATGAAAGAAAGGGAAAGAAAACTGATTTATTTGCACGGCTTGACAGTTCTAAAGTTGCTACCAAGTCTAAAGACTCCCCAAATTTTTCTGGGAAGAAACCTGTAAAAAGGAAAAAAGGAAGCTGTACTTCTGAAGGTATGGGTCAACTAGTAATTTGGGAGAAAAATGATTGTCTAGACTCTAATAATATGGAAGATTTAAGTGTTGTCCCGAGATCACATGGTTTCTATGTAAATGTTCCCCCTCTTGGTCATAGTAATCTGAATGGTCATGACAATGACTCAAATGTGACTCGAAATAAAGTGAGGGAGACATTGCGCCTGTTTCAAGCTGTTTCTAGAAAGCTTCTGCAGGAGGAAGAAGCAAAGTTAAAATACCGAGCAAATACTTATAGGAGGATTGATTTACAAGCGGCTAAGATTCTTAAAGAGAAAGGGAAATATGTTAACACAGGGAAGCAGATCTTGGGACCTGTTCCTGGGGTTGAAGTTGGTGATGAATTTCAGTATAGGGTGGAGCTTAATATAATTGGCCTTCATCGCCCGATTCAGGGGGGCATAGATTATGCCGTGTATAAGGGTAAGGTCCTTGCAACTAGTGTTGTTTCATCCGGGGGCTATGCTGATGAGTTGGATAATTCAGATGTCTTGATTTATACAGGGCAAGGGGGAAATGTGATAAAAAATGATAAAGAACCTGAAGATCAAAAGCTTGAGAGGGGTAACCTTGCCTTGAAGAACAGTGTTGCAGAAAAGAATCCTGTCAGGGTAATACGTGGCTCTGAGTCAATGGATGGAAAATGTAAGAGATACGTCTATGATGGGCTGTATGAAGTTGACGCATATTGGCAGGAAAAGGGGCGACATGGTAAGCTGGTATTTAGGTTTCGGCTGCAAAGAATCCCAGGTCAACCAGAACTTGCTTGGAAAGAAGTCAAAGAATGCAAAAAATTAAGAAAAAGAGAGGGTCTGTGTGTTGATGATATTTCTACTGGGAAAGAGCCAATTCCAATATGTGCTGTGAACACCATAGATGATGAAAAACCCCCACCATTTCAATATACAACTAAAATGATATATCCTAACTGGTGCAATCCCATTCCTCCAGAGGGATGTAGTTGTACTAATGGATGCTCTGACTCAGAGAAATGTTCTTGTGCAGTTAAAAATGGGGGAGAGATCCCATACAATCATAATGGGGCTATTGTAGAAGCAAAGCCTCTCGTCTATGAGTGTAGCGCTTCTTGCAGGTGTCCTTCAACATGTCATAACAGAGTCAGCCAACATGGCATAAAATTTCAGCTTGAAGTTTTTAAAACCAAGACAAGAGGGTGGGGTGTGAGATCCCTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGCTTCTTGAAGAGAAGGAAGCGGAACAAAGAACTGGTAATGATGAATATCTATTTGATATTGGGAATAACTACAACAATACTCTTTGGGACGGACTTTCAAGCTTAATGCCTGATGCACAGTCAAGTTCTTGCGAAATTGTGGAGAATGGTGGCTTCACCATTGATGCTGCCGAGTATGGTAATGTTGGGAGATTTATCAACCATAGTTGCTCTCCTAATCTTTATGCTCAAAACGTCCTTTATGATCATGATGACAGGAGAATACCTCACATAATGCTCTTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTTACTTACGATTACAATTATATGATAGATCAAGTCTATGATTCTGATGGCAATATAAAGAAGAAGGATTGCTATTGTGGTTCTGTAGAGTGCACTGGTAGGATGTATTGA 3450 0.4084 MKCGAIISIVLYAIAAQEKRGQLQFVGSCASFPVYFLPSAFCHCCENRDSGDTDSPLNQNSGGLASYQVQGLYSRLSDKNIGRQSFSVYIVTHGFGLMMGFVENMLHSKSLTRVGSVNSSNNEGRSGNPRMENGNCILLTQLMYKRRKVSAIRDYPEGCGPLVPRIDLTSNVDTASFGFCKGTFVEDKSGEYLKDEFVRTSKLENEPRHSVFLQSSCPTETLGQTNESILGKETSVVSSKIVDKPPLTNDETVKLKLVGLENLEDLELKRTAEAVKCDDSSNKPINFHKIGPSPEGEVVFSGSKFLSPDASIAGSSACWEKAITRRRFPQRRVSAIRDFPPLCGQNAPQLSKDECLEGISFLDNKSTDHQNLAIDDKELKKVTASDVEEVENNVKSGDACNSVGIIRADFDRNATREVNKLDGFGPPSEMKLPPENTRDKGIAVPDESNDHPVLINPLTVVKEESSDAVQIEGTSGMEIIVYSGAQSPVTKPMGISGRHHKFKGNFNELQVSSGSITVLGLMAESECPWRKGKDASRFGMIGGTNERKGKKTDLFARLDSSKVATKSKDSPNFSGKKPVKRKKGSCTSEGMGQLVIWEKNDCLDSNNMEDLSVVPRSHGFYVNVPPLGHSNLNGHDNDSNVTRNKVRETLRLFQAVSRKLLQEEEAKLKYRANTYRRIDLQAAKILKEKGKYVNTGKQILGPVPGVEVGDEFQYRVELNIIGLHRPIQGGIDYAVYKGKVLATSVVSSGGYADELDNSDVLIYTGQGGNVIKNDKEPEDQKLERGNLALKNSVAEKNPVRVIRGSESMDGKCKRYVYDGLYEVDAYWQEKGRHGKLVFRFRLQRIPGQPELAWKEVKECKKLRKREGLCVDDISTGKEPIPICAVNTIDDEKPPPFQYTTKMIYPNWCNPIPPEGCSCTNGCSDSEKCSCAVKNGGEIPYNHNGAIVEAKPLVYECSASCRCPSTCHNRVSQHGIKFQLEVFKTKTRGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNNYNNTLWDGLSSLMPDAQSSSCEIVENGGFTIDAAEYGNVGRFINHSCSPNLYAQNVLYDHDDRRIPHIMLFAAENIPPLQELTYDYNYMIDQVYDSDGNIKKKDCYCGSVECTGRMY 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0454 1149 CDD SET_AtSUVH-like 894 1120 - -
Dere09g0454 1149 Pfam Pre-SET motif 873 969 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere09g0454 1149 SUPERFAMILY PUA domain-like 682 857 IPR015947 -
Dere09g0454 1149 Pfam SAD/SRA domain 700 848 IPR003105 -
Dere09g0454 1149 Pfam SET domain 988 1119 IPR001214 GO:0005515
Dere09g0454 1149 SMART PostSET_3 1133 1149 IPR003616 -
Dere09g0454 1149 SMART set_7 977 1125 IPR001214 GO:0005515
Dere09g0454 1149 SMART G9a_1 696 848 IPR003105 -
Dere09g0454 1149 SUPERFAMILY SET domain 862 1120 IPR046341 -
Dere09g0454 1149 ProSiteProfiles YDG domain profile. 701 844 IPR003105 -
Dere09g0454 1149 ProSiteProfiles Pre-SET domain profile. 914 974 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere09g0454 1149 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 682 861 - -
Dere09g0454 1149 Gene3D SET domain 866 1149 IPR046341 -
Dere09g0454 1149 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 556 1142 - -
Dere09g0454 1149 ProSiteProfiles SET domain profile. 977 1119 IPR001214 GO:0005515
Dere09g0454 1149 MobiDBLite consensus disorder prediction 562 586 - -
Dere09g0454 1149 ProSiteProfiles Post-SET domain profile. 1133 1149 IPR003616 -
Dere09g0454 1149 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 546 1149 IPR025794 GO:0016571
Dere09g0454 1149 Gene3D - 682 865 IPR036987 -
Dere09g0454 1149 SMART preset_2 870 961 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0454 Dere-ChrDere09 7372204 7378124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0454 630 1146 Su(var)3-9 homologs AT5G04940 43.071 1.26e-126 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere09g0454 SAD_SRA 2.6e-51 CL0178