Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0438 ATGCACTCTTTCACATATCAAGCACTGAAAGATGCAACACATGGGTTCAATGAAGAACTAGGAAGGGGTTCCTTTGGCATTGTGTACAAAGGCATCCTCCTCGAATCTAGAACTAGTAGTGTTGTTGCAGTGAAGAGGTTGGATAGATTGGCTCAAGAGCGAGAGACGGAATTTAGGAGAGAAAGTGTGCTAATGGATATGGAAAAGGGGGAGGAAGAAAAGACAGTACTGAAAGACTGGGCACATGATTGCTATATGGAAGGGAGATTAGACGTTCAAGTGGAGAACGACAAGGAAGCCATGAATGATGCAGAGAGGTTGAAGAAGTGGGTAAAGATAGCGATGTGGTGCGTTCAAGAGGATCAAGAGATAAGGCCTACCATGAAGACTGTAATGCAAATGTTGGAAGGCCTTGTTGACGTCTGGAATCCCCCCTTGTCTTCCTCCTTCACCTTGGCTGCCTGA 465 0.4559 MHSFTYQALKDATHGFNEELGRGSFGIVYKGILLESRTSSVVAVKRLDRLAQERETEFRRESVLMDMEKGEEEKTVLKDWAHDCYMEGRLDVQVENDKEAMNDAERLKKWVKIAMWCVQEDQEIRPTMKTVMQMLEGLVDVWNPPLSSSFTLAA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0438 154 SUPERFAMILY Protein kinase-like (PK-like) 3 65 IPR011009 -
Dere09g0438 154 Pfam Protein tyrosine and serine/threonine kinase 16 66 IPR001245 GO:0004672|GO:0006468
Dere09g0438 154 Gene3D Transferase(Phosphotransferase) domain 1 67 143 - -
Dere09g0438 154 ProSitePatterns Protein kinases ATP-binding region signature. 20 45 IPR017441 GO:0005524
Dere09g0438 154 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 65 145 - -
Dere09g0438 154 Gene3D Phosphorylase Kinase; domain 1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0438 Dere-ChrDere09 7248358 7249220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0438 4 83 Receptor kinase-like Gene Family AT3G53380 37.805 2.80e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere09g0438 PK_Tyr_Ser-Thr 1e-05 CL0016