Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0436 ATGGCCATACCCTGCATCTTCGTTGCCCTTCTCTTGCTTCCGTTTAATTTGGCTTCTGGAAACGTGACTTTGAGTTCCACACTCTCCACCAATGATCAAAATCCACGATGGCTCTCATCTTCTGCCGACTTTGCTTTTGGATTTCAAGAAATCAACAACACAAGCCTCTACTTGCTTGCCATTTGGTTCGACAAAATACCTGACAAAACCATTGTCTGGAATGCAAATATCTCAAATCCAGCACCAGCAGGATCGCGGGTTCAGCTCACACCAAGGGGTCTTACACTTACTGATCCTCAAGGTCAACTTATATGGACAGCAGAACCGCAGGAAAATGTCTCCTATGGCGCTATGCTTGACACTGGGAATTTTGTTCTGGCATCCTCTAATTCTTCTTATATGTGGCAAAGCTTCAGTAATCCCACCGACACACTCTTACCATCCCAGACTTTGGATTTAAACGGCAAGCTGTATTCCCGCTTGACACAAACCAATTACACAAAGGGAAGGTTTGAGCTTTATTTCGATAACACCAATCTCTTGTTAAGCCAGATTGGGTGGCCAACTGAATCTCGTTACACCAATTACTTCAGTGTCAACACCAGTTCTGCAACCAATGCTAATGGCTCTGCTTCAGAGCTAGTCTTCGATTCATTAGGGGATGTTTATGTAGAGACAAGGGGTGGAGGTCAACAAACACTTGGATGGACCAATTCAGTTCTTGATGTAAACCGATATTACTACAGAGCTACGCTAGATTACTATGGAGTTTTTACGCAGTACTCTCATCCGAGGGGATCCAGTGGCGACCAAGTTTGGTCAATTGAGAGGTATGTTCCTAATAATATTTGCGCTGCCATATTTAGCGATTTGGGTGGCGGTTGTTGTGGGTATAATAGCTACTGTTCCATAGCAAATAGGAGGCCCACCTGCACATGCCCAGATGGGTATACCCTAGTTGATCCAAACAACCTATTTGGAGGATGCCGACCTAATTTCTCATTTGGTTGTGGAGCTGATGATGTAGCATCACAGCACAACCCAGAAGAGGTATATGAGGTTAAGGTTCTGCAAAACGTAGATTGGCCGTTAGGAGATTATGAAAGGTTGTACAATTATACACAAGATGATTGCCAAAAGTCCTGCTTGTACGATTGTAATTGTGCTGTTGCCATTTTTGACAACAGAAATACATGCTGGAAGAAAAAACTACCCCTCTCTAATGGAAGAGCAAACGCAGGTGGTGGTCAAACGCCACTCATCAAAACAAGAATTCAGCCACTGGGCAACTTTGATCCTCCCGTGAAAAGGGAGGAAAGAATTCAGCCTGCTCTTTTAGGGTCCCTTATTAGTTCCCTTGTCATTAATACTCTGCTTGTAGCCACCATAGTTATGATTATTTACTTAAAGCCAAAAAAGGTTGTCCAAGTTTCAAGTCTTCTTGACATGAATCTGCACTCTTTTTCACATGAAGCATTGACAGAGGCAACGCATGGGTTCAGTGAAGAACTAGGAAGGGGTTCCTTTGGCATTGTGTACAAAGGCACTCTTAAATCGGGAACTAATAGTGTTGTTGCAGTGAAGAGGTTGGACAGACTGGCTCAAGAACGAGAGAAGGAATTTAGGACAGAGTTGAGGGCCATTGGAAAGACATTTCACAAAAATCTGGTTCGGTTGATTGGCTTCTGTGACGAGGGAGTTCATAGACTTCTGGTGTACGAGTTCATGAGCAATGGTGCACTTTCAAACATCCTATTTGGACAACCCAAACCCATTTGGAATCTGAGGGTCAAATTTGCTTTAGGGATTGCAAGGGGGTTGCTTTACTTGCACGAAGAATGTGACACGCCCATCATCCATTGTGATATAAAACCTCAAAATATACTAATAGACGAACATTTCGTGGCAAAAATCTCAGACTTTGGGCTGGCCAAGTTGTTGTATTCCAATCAGAGCCGAACCCATACAATGATAAGAGGAACAAGAGGATATGTGGCACCCGAATGGTTCAAAAATGTGCCAGTGACTGCAAAAGTGGATGTTTATAGCTACGGTGTGATGCTGTTGGAAATAATTTGTTGCAGAAGAAGTGTGCTAATGGATATGGATCGGGAGGAAGAAAAGGCAGTACTAACAGATTGGGCATATGATTGCTATATGGAAGGGAGATTAGACATTCTGGTGGAGAATGACAAGGAAGCCATGAATGACGCAGGGAGGTTGAAGAAGTGGGTGATGATAGCAATGTGGTGTATTCAAGAGAATCAGGAGATAAGGCCTACCATGAAGACTGTGATGCAAATGTTGGAAGGCCTTATTGACATCCCGAATCCCCCATTGCCTTCTTCATTCTCAACTGTTTGA 2364 0.4344 MAIPCIFVALLLLPFNLASGNVTLSSTLSTNDQNPRWLSSSADFAFGFQEINNTSLYLLAIWFDKIPDKTIVWNANISNPAPAGSRVQLTPRGLTLTDPQGQLIWTAEPQENVSYGAMLDTGNFVLASSNSSYMWQSFSNPTDTLLPSQTLDLNGKLYSRLTQTNYTKGRFELYFDNTNLLLSQIGWPTESRYTNYFSVNTSSATNANGSASELVFDSLGDVYVETRGGGQQTLGWTNSVLDVNRYYYRATLDYYGVFTQYSHPRGSSGDQVWSIERYVPNNICAAIFSDLGGGCCGYNSYCSIANRRPTCTCPDGYTLVDPNNLFGGCRPNFSFGCGADDVASQHNPEEVYEVKVLQNVDWPLGDYERLYNYTQDDCQKSCLYDCNCAVAIFDNRNTCWKKKLPLSNGRANAGGGQTPLIKTRIQPLGNFDPPVKREERIQPALLGSLISSLVINTLLVATIVMIIYLKPKKVVQVSSLLDMNLHSFSHEALTEATHGFSEELGRGSFGIVYKGTLKSGTNSVVAVKRLDRLAQEREKEFRTELRAIGKTFHKNLVRLIGFCDEGVHRLLVYEFMSNGALSNILFGQPKPIWNLRVKFALGIARGLLYLHEECDTPIIHCDIKPQNILIDEHFVAKISDFGLAKLLYSNQSRTHTMIRGTRGYVAPEWFKNVPVTAKVDVYSYGVMLLEIICCRRSVLMDMDREEEKAVLTDWAYDCYMEGRLDILVENDKEAMNDAGRLKKWVMIAMWCIQENQEIRPTMKTVMQMLEGLIDIPNPPLPSSFSTV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0436 787 Pfam D-mannose binding lectin 70 156 IPR001480 -
Dere09g0436 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 162 IPR036426 -
Dere09g0436 787 ProSiteProfiles Protein kinase domain profile. 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0436 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 26 781 - -
Dere09g0436 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 777 - -
Dere09g0436 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Dere09g0436 787 Gene3D Phosphorylase Kinase; domain 1 462 575 - -
Dere09g0436 787 ProSiteProfiles Bulb-type lectin domain profile. 23 139 IPR001480 -
Dere09g0436 787 CDD STKc_IRAK 504 772 - -
Dere09g0436 787 SUPERFAMILY Protein kinase-like (PK-like) 481 770 IPR011009 -
Dere09g0436 787 SMART blect_4 15 141 IPR001480 -
Dere09g0436 787 ProSitePatterns Protein kinases ATP-binding region signature. 504 528 IPR017441 GO:0005524
Dere09g0436 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 16 139 - -
Dere09g0436 787 Gene3D - 19 140 IPR036426 -
Dere09g0436 787 Gene3D Transferase(Phosphotransferase) domain 1 576 776 - -
Dere09g0436 787 FunFam S-receptor-like serine/threonine-protein kinase 470 575 - -
Dere09g0436 787 SMART serkin_6 498 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0436 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Dere09g0436 787 Pfam Protein kinase domain 501 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0436 Dere-ChrDere09 7187131 7189494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0436 484 771 Receptor kinase-like Gene Family AT1G60800 42.905 2.55e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere09g0436 Pkinase 9.7e-50 CL0016