Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0430 ATGCATATAGAGGAATTGAAGGGAGGAGAGGTGGAAGGTGGTGAGGAAGGAAAAGTATATGTCGGAAATGGTGTTATCGGTGGGACAAGCTTTGTTGTGTCTGATGCAAAAAGGGCTCTGGTTGGAGCAGGGGCTCGGGCGCTCTTCTATCCCACTCTGCTTTATAATGTCGTAAGGAATAAGATTCAGGCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTCCCTATTGATGTTCCTCGTTTAAAGGAGCTTGGGGTTCAAGGAGTCATCACATTGAATGAGTCATACGAGACCTTGGTGCCAACCGCATTATATCATGCTCATGGAATTGACCATCTCGTGATTCCTACTAGAGACTACTGTTTTGCACCTTCGTTGAGTGATATATGCTCTGCTGTAGACTTCATTCATGAAAATGCGTTATCTGGGCGGGTTACATATGTCCACTGCAAGGCTGGGCGTGGTCGCAGCACAACTATTGTCATCTGTTACCTGGTGCACTACAAGCTGATGACACCTGATGCTGCATATGATTATGTAAAGTCAATTCGGCCAAGGGTTCTTCTAGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTACCACCTTAGGGTTAGGAAAACTATTGCCTGTGCTCCCTCATTCAGCCTAATAGTGAAAGCATCTGAGGCAGCAGCAATTTCACGGGACCTTGTAACATTTGATGACAGTTCGGCAGTTGTGGTTACGGAATCGGATCTTGAAGGTTATGACCCCAGTATTCATTCAAGTACTGTGGGAAGTGAGATATGGGCGGATTTGAGTGTGGTTTGCCGTGTGCGAGTTGCTGGGCAGGCAGCATTGGCAAGAATATCATGCCTTTGGCTGCGGTATGGTACACACGAGAAGGTTTCTACAGCAAAACTGAGCAGCAGCAATCACTTGGGAGGCATTAGTGTTGATATCCATGTGTACTGA 984 0.4644 MHIEELKGGEVEGGEEGKVYVGNGVIGGTSFVVSDAKRALVGAGARALFYPTLLYNVVRNKIQAEFRWWDKVDEFILLGAVPFPIDVPRLKELGVQGVITLNESYETLVPTALYHAHGIDHLVIPTRDYCFAPSLSDICSAVDFIHENALSGRVTYVHCKAGRGRSTTIVICYLVHYKLMTPDAAYDYVKSIRPRVLLASSQWQAVQEYYHLRVRKTIACAPSFSLIVKASEAAAISRDLVTFDDSSAVVVTESDLEGYDPSIHSSTVGSEIWADLSVVCRVRVAGQAALARISCLWLRYGTHEKVSTAKLSSSNHLGGISVDIHVY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0430 327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 212 IPR029021 -
Dere09g0430 327 CDD PTPMT1 68 210 IPR044596 GO:0004721
Dere09g0430 327 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Dere09g0430 327 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Dere09g0430 327 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Dere09g0430 327 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Dere09g0430 327 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Dere09g0430 327 FunFam Dual specificity phosphatase domain protein 68 215 - -
Dere09g0430 327 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 298 - -
Dere09g0430 327 Pfam Dual specificity phosphatase, catalytic domain 89 210 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0430 Dere-ChrDere09 7122606 7125990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0430 1 327 Protein tyrosine phosphatase (PTP) family AT2G35680 60.411 1.41e-135 387