Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0425 ATGACCCGGCGATGTTCTCATTGCAGCCACAATGGCCACAACTCAAGGACTTGTCCCAACCGTGGAGTCAAGCTCTTTGGAGTTCGATTGACGGACGGGTCGATCCGGAAGAGTGCTAGTATGAGCAGTCTCAGCCACTACGCTGCGTCGACCTCCGGAGCTCATCATGCCGGGTCTGTCAATCCGGGTTCTCCCGGTGAGACGCCCGATCATGGTGCTGCCGCCAACGGTTACGCCTCCGAGGATTCTGTTCCTGGGTCGTCGTCAATTTCCCGGGAGAGAAAGAAGGGTGTTTCGTGGACTGAGGAGGAACATAGAATGTTCTTACTTGGATTGCAGAAGCTTGGCAAAGGTGATTGGCGTGGAATTGCACGAAGTTATGTTATATCAAGGACACCTACTCAAGTAGCTAGCCATGCTCAGAAATATTTCATAAGGCAAAGCAATGTGTCTCGGAGGAAAAGACGTTCAAGTTTGTTTGACATTGTTGCAGATGAAACAGCTGATACTCCGATGGTACCCCAAGATTTCTTGCCAGAGGCTGAACAAGAAGGCAATGATCCCTTGCCTGCTCCCCCGACCCTTGATGAAGAGTGCGAATCTATGGATTCCGCTAACTCAAATGATGGAGACTCTGCCTCTTTAAAGCCAGATAGCTCACAATCACAGTACCCGGTGCTATATCCTGCATACTTGTCTCCTTTCTTTTCATTCCCTCTGCCCTATTGGTCAGGATACAGTCCAGAGCCCACGAAGAAGACAGTACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAGAGTCCAATCAACGTTGATGAATTGGTTGGCATGTCAAAACTAAGTTTGGGAGACTCTATTGGCGACTCTGGCCCTTCCTCTCTCTCACTAAAACTCCTGAAGGGCCCCTCTCCGCAGTCAGCTTTTCATGCAACTCCAGCATGTGGTAATTCAAACATGAATGGCAGTGCGATCCATGCACTTTAA 987 0.4934 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAASTSGAHHAGSVNPGSPGETPDHGAAANGYASEDSVPGSSSISRERKKGVSWTEEEHRMFLLGLQKLGKGDWRGIARSYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADETADTPMVPQDFLPEAEQEGNDPLPAPPTLDEECESMDSANSNDGDSASLKPDSSQSQYPVLYPAYLSPFFSFPLPYWSGYSPEPTKKTVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLLKGPSPQSAFHATPACGNSNMNGSAIHAL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0425 328 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Dere09g0425 328 Gene3D - 98 150 - -
Dere09g0425 328 PANTHER TRANSCRIPTION FACTOR KUA1 3 267 - -
Dere09g0425 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Dere09g0425 328 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Dere09g0425 328 SMART sant 96 146 IPR001005 -
Dere09g0425 328 FunFam transcription factor MYB1R1 98 149 - -
Dere09g0425 328 MobiDBLite consensus disorder prediction 1 21 - -
Dere09g0425 328 CDD SANT 99 144 IPR001005 -
Dere09g0425 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Dere09g0425 328 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Dere09g0425 328 MobiDBLite consensus disorder prediction 178 220 - -
Dere09g0425 328 MobiDBLite consensus disorder prediction 205 220 - -
Dere09g0425 328 MobiDBLite consensus disorder prediction 52 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0425 Dere-ChrDere09 7069705 7072427 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere09g0425 Myb_DNA-binding 1.4e-10 CL0123