Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0416 ATGCGAGTCGTCAAAGTTAAAGCCTCTCAGAAACCCTATCTCTCTTTGATAGCACTTGGTGACTGCGCGGCTCGGTTGGTTTCTTGGTCTGATCCAATGGGTGCTTACAAGTATGTGTCAGAGCTTTGGCGCAAGAAGCAGTCTGATGTCATGAGATTCTTGCAGAGGGTGAGGTGCTGGGAGTATCGTCAGCAACCTTCCATTGTCCGCTTGACTAGGCCCACACGTCCTGACAAGGCTCGTCGCTTGGGTTACAAGGCTAAGCAGGGCTATGTGGTTTACCGTGTCCGTGTTCGGAGGGGTGGAAGGAAGAGACCAGTTCCCAAAGGTATTGTATACGGGAAGCCCACAAACCAAGGTGTTACTCAACTGAAATTTCAGCGGAGCAAGAGATCAGTGGCTGAGGAGCGAGCTGGACGGAAGCTGGGTGGCCTTAGGGTCCTGAATTCCTACTGGGTGAATGAGGACTCGACCTATAAATATTTTGAGATAATTCTGGTGGATGTTGCCCACAATGCTATCAGAAATGATCCAAGAATCAATTGGCTATGCAATCCTGTCCATAAACACAGGGAGCTACGTGGGCTCACTTCAGCTGGTAAAAAATACAGGGGCTTGCGTGGCAGAGGACATCTCCACCACAAAGCGCGTCCATCCCGCAGGGCTACCTGGAAGAGAAACAATACTCTTTCTCTTCGTCGCTACCGCTGA 711 0.5049 MRVVKVKASQKPYLSLIALGDCAARLVSWSDPMGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLHHKARPSRRATWKRNNTLSLRRYR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0416 236 PANTHER RIBOSOMAL PROTEIN L15 33 236 IPR000439 GO:0003735|GO:0005840|GO:0006412
Dere09g0416 236 ProSitePatterns Ribosomal protein L15e signature. 78 101 IPR020925 GO:0003735|GO:0005840|GO:0006412
Dere09g0416 236 FunFam Ribosomal protein L15 33 236 - -
Dere09g0416 236 SMART Ribosomal_L15e_2 34 225 IPR000439 GO:0003735|GO:0005840|GO:0006412
Dere09g0416 236 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 33 227 IPR012678 GO:0003735|GO:0005840|GO:0006412
Dere09g0416 236 Gene3D Ribosomal protein l15e 33 236 IPR024794 GO:0003735|GO:0005840
Dere09g0416 236 Pfam Ribosomal L15 34 222 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0416 Dere-ChrDere09 6946019 6951202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0416 33 236 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.157 1.26e-127 357