Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0400 ATGGTATCGCTTTCCCGATCACGCGAAGAACCGGAAAAATGCTGAAACGTAAAAGAGCCATTTGATCCGCAAAGAAGAGATATGAAGATTGTGGAGATGATAAAGGAGGGAATGGCTGAAGATGTAGCCATTATAGGAGGGCTAATAGCAGTGCAATTTGTGAATGCTGGCCACGCTGTGTTGCTAAGCTATCTCATGTCTTTGGGACTCAACTCTCTTACCATTGTCATTTTCACTTCCATCTCTACATTCCTCATCCTCATCCCCTTTGCCTTCTATTTCGAAAGGATTCAATGGTACCAGAAATTCAGTTTCAAGTTGATTATGCAAATATTTCTGCTTTCCTTTGGAGGGGTAACTTTGTTCCAGTACTTCTTCCTTAAAGGAATAAAACAAACTTCGCCAACAATGGCAACTGCCATGACAAACCTTGCCCCAGGTCTTATCGTCATCATCGCCTGGACTTTTAGGTTGGAGAAAATCAACATCAGATGCACGTATAGTAAAGTCAAAATCTTAGGCACTTTAATCTGCGTGGTTGGGGCTCTCACAATGAGCATAATGCAGAGCATATCCTCCCCTGCGACGAAAAGAGAGGTTGAAGTGAATTTGTCATCGTCCCCACCACATGCCATATTTGACATGCACAAGATAACTGGTTGTCTTTATCTCATGGCTGCACTCGTCATATTATCAAGCAACTCTGTCTTGCAGGCTTTTATATTGGGAGAGTTTCCTGCACCTATATCCCTCTGCGCATTCACATCCTTATTTGGAGCTTTCATGACTGCAATTGCTCAGTTACTTGAAGATCACAGACTAGAAACTGGTTGGCCATTTCTCAGTGTAGCAGAATTCATTGGCTATTCTTTTATGGCTGGTGCGGTGATTGGATTATGTCTAAGCTTCCATGGATGGGCAGTTAAGAAGAAAGGACCAGTTCTGGTCTCTATTTTCAGTCCCATTAGTACAGTCTGCTCCATCATTTTCTCTGTTGTAACACTTGGAGATACTATTAATATCGGAAGCCTTTTGGGTATGTTTCTCATGTTCACGGGGCTCTATGCTGTGCTTTGGGCTAAAGGGAAAGAAGGGTTCGCTGGAGATGGCATAGAGACCGAGTTTGATGTAGAGAAGCCTCTCCTAAGTTGA 1152 0.4297 MVSLSRSREEPEKCXNVKEPFDPQRRDMKIVEMIKEGMAEDVAIIGGLIAVQFVNAGHAVLLSYLMSLGLNSLTIVIFTSISTFLILIPFAFYFERIQWYQKFSFKLIMQIFLLSFGGVTLFQYFFLKGIKQTSPTMATAMTNLAPGLIVIIAWTFRLEKINIRCTYSKVKILGTLICVVGALTMSIMQSISSPATKREVEVNLSSSPPHAIFDMHKITGCLYLMAALVILSSNSVLQAFILGEFPAPISLCAFTSLFGAFMTAIAQLLEDHRLETGWPFLSVAEFIGYSFMAGAVIGLCLSFHGWAVKKKGPVLVSIFSPISTVCSIIFSVVTLGDTINIGSLLGMFLMFTGLYAVLWAKGKEGFAGDGIETEFDVEKPLLS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0400 383 Pfam EamA-like transporter family 59 186 IPR000620 GO:0016020
Dere09g0400 383 Pfam EamA-like transporter family 219 358 IPR000620 GO:0016020
Dere09g0400 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 282 362 - -
Dere09g0400 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 84 187 - -
Dere09g0400 383 PANTHER WAT1-RELATED PROTEIN 47 364 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0400 Dere-ChrDere09 6773897 6775857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0400 32 367 Nodulin-like Gene Family AT5G47470 54.896 2.40e-125 365