Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0395 ATGGCTACTTTGTTCGCCTCGCTGATTTTGGTTTCGGTTTGCTTATTATTTCATGCAGTAACAGTAAGATGTACACCCCACGACGATAACACCCCCAGAACATCAGTGTCTTCTGCAAACTCATCATCCAAGCACCATCACAGGTGGGTTGGGCCCGTCGGTCACCGCGTCATCACCGTGGATGTGAACGGCACCGGGCAATTCCGGTCGGTGCAGGCCGCCGTCAATGCTGTCCCAGACAATAATCGAATGAACGTCCTCATTAATATTAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGCAACGAAGCCATACATAACGTTTCAGGGAGCGGGGAGGGATGTGACGGTGATAGAATGGCATGACAGGGCCAGCGATCCAGGTCCCAATGGACAACAGCTGCGCACTTACAGAACAGCTTCTGTTACTGCCTTCGCCAACTATTTCTCTGCCCGGAATATCAGCTTCAAGAACACAGCGCCAGCACCGATGCCGGGAATGCAGGGATGGCAGGCGGCAGCGTTTCGAATATCCGGTGACAAAGCATACTTCTCAGGCTGTGGATTCTACGGTGCGCAAGACACTCTTTGTGATGACGCTGGCCGCCATTATTTCAAGGATTGCTACATCGAGGGCTCCATTGACTTCATCTTTGGAAATGGCCGCTCCATGTACAAGGATTGTGAGCTGCACTCAATAGCCACGAGGTTCGGGTCCATAGCAGCCCACAATAGAAAACACCCATACGAGAAGACGGGCTTTGCGTTCGTACGGTGCAGGGTGACGGGCACGGGCCCACTCTATGTTGGCCGGGCAATGGGCCAGTACTCAAGAATTGTCTACGCTTATACGTATTTTGATGACATAGTCGCACATGGTGGTTGGGACGACTGGAACCATGCGGACAACAAAAACAAGACTGTGTTCTTCGGAGTGTACAAGTGCTGGGGCCCAGGAGCAGAGGCCGTGCGTGGTGTGTCGTGGGCCCGAGAGCTTGATTTTGAATCCGCCCATCCATTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATCGCACCCTCTGATGCATAG 1080 0.5287 MATLFASLILVSVCLLFHAVTVRCTPHDDNTPRTSVSSANSSSKHHHRWVGPVGHRVITVDVNGTGQFRSVQAAVNAVPDNNRMNVLINISAGYYIEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTAFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHNRKHPYEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWNHADNKNKTVFFGVYKCWGPGAEAVRGVSWARELDFESAHPFLVKSFVNGRHWIAPSDA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0395 359 Gene3D - 54 358 IPR012334 -
Dere09g0395 359 FunFam Pectinesterase 53 356 - -
Dere09g0395 359 SUPERFAMILY Pectin lyase-like 55 356 IPR011050 -
Dere09g0395 359 MobiDBLite consensus disorder prediction 28 45 - -
Dere09g0395 359 Pfam Pectinesterase 58 350 IPR000070 GO:0030599|GO:0042545
Dere09g0395 359 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 53 355 - -
Dere09g0395 359 ProSitePatterns Pectinesterase signature 2. 212 221 IPR033131 -
Dere09g0395 359 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0395 Dere-ChrDere09 6719854 6723158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0395 1 359 Carbohydrate Esterase AT5G47500 74.590 0.0 557