Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0392 ATGTCCCAATCTCCGTCTTCTTCTTCCATGGCCACTCTGTTTCCCAAAACCCTAACTGCTACTTGGTCCTTTCTGCTCCGGCCCCATTTAACTCGAACTCATCATTCGCCCACTCGTTCTAAAGTATCTGCTATTCGAACCATGAGCTCCGGGTCTACTCAGCGCGTCTTCCAGCTGAAGTTAGACCCACTGACCGGTAAGTCAGAATGGGTCGTGATTGAAGAAGACGAAGAAGAAAGCTTTGCACAGAATTTCGAGCAACCTCTTCTGGCTACAACCTCCTATTTAGACATGCTCAATGACTCTAAGAGGAATAGAGCTTTCCGGGAAGCCATTGAAAAGACCATTACCAAACCCTGCCACGTCCTTGATATCGGTGCTGGAACTGGACTGCTGTCAATGATGGCTGCACGAGCTATGGGCCTGGGTGACTCAATCACGTGTAGTGGTAGCAAAGGGATACTAACGGCATGCGAGTCTTACCTTCCAATGGTAAAGTTGATGAAAAAAGTTATACGCTTGAATGGAATGGAAGGTAAAATCAAAGTAATCAACAAGCGCTCTGATGAACTCAAAGTTGGCGTTGATATGCCTTCACGCGCAGATGTACTTGTAAGCGAGATACTAGACTCAGAACTCCTGGGAGAGGGACTTATACCGACCCTGCAACATGCACATGACATGTTGTTAGTGGAAAATCCTTTGACTGTGCCATATCGAGCGACTACTTATGGACAGCTGGTTGAAAGCAAATTCTTGTGGCAGCTGCACGATTTACATAACAATGAGGCAAGTGCATCTGATGGCATTCATCTTACCTCTCCAGTACATGATAGTGTTTTGAGCATCAAACGCCAGCAATATGCCATGCATTGCAATCCAATAAGAGAAGAAATAAAACTGCTTTCAGAACCCTTCAAAGTTTTTGAATTTGAATTTTGGAAACGGCCAGAGAGTCATGGAGAAACTGAGCTGCAGATAAAGGCAACTAATGATGGTACAGTTCATGCTGTGGTCTCATGGTGGGTACTTCAACTTGATCGTGAAGGGACAATCCATTATTCCACTTCTCCTCAGTGGATAAACTCACCATGGATTACAAGCTCTATTGATTGGTGTGATCACTGGAAACAGTGTGTTTGGTTTGTCCCTGGCAGTGGTATTTCCATACTCAAGGGGGAAGAAATTTGTTTACATGCTATACATACTGATACTAGCATCTCCTACAATCTAGAGACCCAAGTGCCAAGAACTATGGTTTTTCAGCATGGGCTGAGTGATGCAGATTTGCCACTTGTGCTGTCACCAGAAAGGATCGCAATCTATGGAGACAAAGAATGGAGGTTTTCAATGTTGAAAGCAGTGGAAAGTGCATTGCAGGGAAGAGTTTGCTCATTATGCTTGGTTGCAGATGATAGTGTTTTTTTACCTCTTCTTGTGGCGCATCTTTCAGAAACATCACATGTGATTTCATTATTTCCGGGGCTTGGGGAGAAGGGCCTCCAATATTTGCAAGCTGTTTCTCATGTAAATGGTTTATCAAGGGATCACATTGAAGTTCTTGAAAAAAGGGCAAAACACTTGACCATGCATGATACACATCAGAAAAAGGTTGATCTGTTGATAGCAGAACCATTTTATTATGGACATGATGGCATGCTTCCTTGGCAGAACCTGCGGTTTTGGAATGACCGGACAAATCTTGATTCTGTCCTTTCTGAAGATGCGCTGATTATTCCTTGTAAAGGAATATTGAAGGCTTGTGCCATGTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTGCTTGAGTAAGATAGAAAGTTTTGAGCATTCTGGGGTAAATACCACTTTGGGGGCTTGTGGTCATTTACCTGAATCAAATGAGACTCCTTGTCTGCCATTTTTTGTCTGGCAATGTGGGGAATTTGAGGAACTTAGTGTGACATTTGCAGTTATGGAGTTTGATTGCTCAAAACAAATAGACCTATGTCATGGGAAATCCCAGGTAAATTTTATCAAGACAGGGGTGTGCCATGGGTTTGTACTATGGATTGACTGGGTCATGGATGTGCAGGATACTATTGTCGTATCTACTGGTCCAGGCAAGAGATATTGGAAGCAGGGAGTAAAGCTTCTGGCAACACCTAGAGCAGTAGGACCCCAAAAATCAAGAAATGTGGGAGAATGTTGTTCTGCAGTTCTTGAAGCATCCTTTGATCCATCAAATGGGCAACTCAAAATAGCACTCGATTTCTTGTGA 2259 0.4343 MSQSPSSSSMATLFPKTLTATWSFLLRPHLTRTHHSPTRSKVSAIRTMSSGSTQRVFQLKLDPLTGKSEWVVIEEDEEESFAQNFEQPLLATTSYLDMLNDSKRNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAARAMGLGDSITCSGSKGILTACESYLPMVKLMKKVIRLNGMEGKIKVINKRSDELKVGVDMPSRADVLVSEILDSELLGEGLIPTLQHAHDMLLVENPLTVPYRATTYGQLVESKFLWQLHDLHNNEASASDGIHLTSPVHDSVLSIKRQQYAMHCNPIREEIKLLSEPFKVFEFEFWKRPESHGETELQIKATNDGTVHAVVSWWVLQLDREGTIHYSTSPQWINSPWITSSIDWCDHWKQCVWFVPGSGISILKGEEICLHAIHTDTSISYNLETQVPRTMVFQHGLSDADLPLVLSPERIAIYGDKEWRFSMLKAVESALQGRVCSLCLVADDSVFLPLLVAHLSETSHVISLFPGLGEKGLQYLQAVSHVNGLSRDHIEVLEKRAKHLTMHDTHQKKVDLLIAEPFYYGHDGMLPWQNLRFWNDRTNLDSVLSEDALIIPCKGILKACAMSLPDLWKSRCCLSKIESFEHSGVNTTLGACGHLPESNETPCLPFFVWQCGEFEELSVTFAVMEFDCSKQIDLCHGKSQVNFIKTGVCHGFVLWIDWVMDVQDTIVVSTGPGKRYWKQGVKLLATPRAVGPQKSRNVGECCSAVLEASFDPSNGQLKIALDFL 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0392 752 PIRSF Arg_N-mtase 54 750 IPR014644 GO:0006479|GO:0008168
Dere09g0392 752 FunFam Protein arginine N-methyltransferase 7 430 580 - -
Dere09g0392 752 Gene3D Vaccinia Virus protein VP39 432 580 IPR029063 -
Dere09g0392 752 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 74 412 IPR025799 GO:0016274|GO:0018216
Dere09g0392 752 Gene3D - 240 421 - -
Dere09g0392 752 Gene3D - 584 751 - -
Dere09g0392 752 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 502 720 IPR025799 GO:0016274|GO:0018216
Dere09g0392 752 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 501 720 IPR029063 -
Dere09g0392 752 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 418 752 IPR025799 GO:0016274|GO:0018216
Dere09g0392 752 Pfam Lysine methyltransferase 71 184 IPR019410 -
Dere09g0392 752 FunFam Protein arginine N-methyltransferase 1.6 584 751 - -
Dere09g0392 752 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 409 IPR029063 -
Dere09g0392 752 Gene3D Vaccinia Virus protein VP39 88 239 IPR029063 -
Dere09g0392 752 FunFam Protein arginine N-methyltransferase 88 239 - -
Dere09g0392 752 FunFam Protein arginine N-methyltransferase 1.6 240 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0392 Dere-ChrDere09 6685243 6690494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0392 97 244 C2H2 Transcription Factor Family AT3G12270 29.936 2.28e-09 58.9