Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0369 ATGTCACCGCTTCAGCAACCTTCTAAACGCCTCGGTACACGTGTCACTCCAACTCTGCTCTGTTTCAGCGCCTCTGGAAATAGCGGTTCTCGTTCGGTTTATAATTCTCAGCTGAAAACCCAGTCGTCTCATGTATCTCCTGTTCTAACTGAACCTGTTCCCATGAACAAGTCAAGACTAGGAATCCATTCTAGTGTGTTAAGTTACTCCCAGCAGGAGCCATCCCCCACTCCCAGTAAGTATACAAGAACCGGTTCAAGGAAGAGTGTTGGAAGCCTCGATGATGTTCGCTCTAATGGATGGCTGGACGCTATGAAGGCCTCTTCACCCCCCAGGAAGAAGTTAGTTAAGGGTTCTAATAACCCTCAGGTCACTTCTTTTGACTCAGACGTTGAGGACTATCACTCCTGGATGCTTGAGTATCCATCCGCACTGGACTCCTTTAACAACATTATTGAACGTGCAAAGAATAAGAAGATTGCAATGTTCCTGGACTATGACGGAACTCTTTCCCCAATAGTAGATGACCCAGATTCTGCCTTTATGACTGAAGCTATGCGGGCAACGGTGAGAAGTGTGGCAAAATATTTTCCCACTGCAATCATAAGTGGAAGAAGCCGTGATAAGGTTCTTGATTTAGTGAAATTAACCGAACTCTACTACGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTCAGTGAGTCTCTGCCCATTAACCATCCCAATTGTGTTAAATCTACTGACCATCAGGGAAAGGAAATAACTGTGTTCCAACCTGCAAAGGAATTCCTGCCAATGATAGATGAGGTTTTTAGAACCCTCGTCGAGATAACTAAGGATATCAAAGGCGCAAAGGTTGAAAATCACAAGTTTTGCGCTTCTGTACATTACCGTAATGTAGATGAGAATAATTGGATAACCGTTGGACAGCTTGTCCATGACATGTTAAAAAACTACCCTCGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGGTGCGTCCGGTGATTGATTGGGACAAAGGAAAAGCAGTTGAGTTTTTGCTTGAGTCTCTAGGGTTAACTGATAGGGATGACGTGCTTCCCATCTACATTGGAGATGATAAGACTGACGAAGATGCATTTAAGGTGCTGCGGGAGAGCAATCGAGGTTATGGCATTCTGGTTTCATCCGTGAGGAAGGAAAGCAATGCCTTGTACTCTCTCAGGGACACTACTGAGGTTATGAAATTTCTGCAGCTCCTAGTCAATTGGAAGAGACAAGAAGACGAGGAGAAGAAGCAAACGCCATCCGGAGGCATTTGGTTTTGA 1314 0.4498 MSPLQQPSKRLGTRVTPTLLCFSASGNSGSRSVYNSQLKTQSSHVSPVLTEPVPMNKSRLGIHSSVLSYSQQEPSPTPSKYTRTGSRKSVGSLDDVRSNGWLDAMKASSPPRKKLVKGSNNPQVTSFDSDVEDYHSWMLEYPSALDSFNNIIERAKNKKIAMFLDYDGTLSPIVDDPDSAFMTEAMRATVRSVAKYFPTAIISGRSRDKVLDLVKLTELYYAGSHGMDIIGPVSESLPINHPNCVKSTDHQGKEITVFQPAKEFLPMIDEVFRTLVEITKDIKGAKVENHKFCASVHYRNVDENNWITVGQLVHDMLKNYPRLRSTHGRKVLEVRPVIDWDKGKAVEFLLESLGLTDRDDVLPIYIGDDKTDEDAFKVLRESNRGYGILVSSVRKESNALYSLRDTTEVMKFLQLLVNWKRQEDEEKKQTPSGGIWF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0369 437 MobiDBLite consensus disorder prediction 26 49 - -
Dere09g0369 437 NCBIfam HAD-IIB family hydrolase 162 380 IPR006379 -
Dere09g0369 437 Gene3D - 160 247 IPR023214 -
Dere09g0369 437 Gene3D - 259 432 IPR023214 -
Dere09g0369 437 MobiDBLite consensus disorder prediction 26 55 - -
Dere09g0369 437 MobiDBLite consensus disorder prediction 67 93 - -
Dere09g0369 437 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 68 428 IPR044651 GO:0004805|GO:0005992
Dere09g0369 437 Pfam Trehalose-phosphatase 163 406 IPR003337 GO:0003824|GO:0005992
Dere09g0369 437 NCBIfam trehalose-phosphatase 158 417 IPR003337 GO:0003824|GO:0005992
Dere09g0369 437 CDD HAD_TPP 161 411 - -
Dere09g0369 437 FunFam Trehalose 6-phosphate phosphatase 267 426 - -
Dere09g0369 437 SUPERFAMILY HAD-like 161 421 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0369 Dere-ChrDere09 6481891 6487455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0369 156 416 Trehalose Biosynthesis Gene Families AT1G70290 26.449 1.47e-09 58.5