Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0360 ATGAACACATTTTTACATGTTCCTCCAGGCTTTCGGTTCCACCCCACAGATGAGGAACTTGTCGATTACTACCTTAGAAAAAAGATAGCCTCTAAAAGGATCGACCTGGATGTTATTAAAGATGTGGATCTCTATAAAATAGAGCCATGGGATCTTCAAGAACTATGCAAAATCGGAGCGGAAGAACAGAATGACTGGTACTTCTTCAGCCACAAAGATAAGAAGTACCCAACAGGAACTCGAACGAATAGAGCCACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGATAAGGCAATCTACCGTAGGCATTGCTTGATTGGGATGAGAAAGACTCTTGTTTATTACAAGGGACGAGCCCCAAATGGACAGAAGTCTGACTGGATCATGCATGAGTATCGACTTGAAACTAATGAAAATGGAACTCCTCAGGAAGAAGGGTGGGTTGTGTGTAGAGTGTTCAAAAAGCGAATGACAAGCGTGCGGAAAATGGGGGAGTACGAGTCACCATGCTGGTTTGAGGACCAGGTGTCCCTGATGCAAGAGCTTGAATCTGCAAAGCCAATATCTCACCCTTATGCATCTAATTACCATCATCACTACTACGTACCTTGCAAGCAGGAGCTACAGTTGCAATATAATATGGCCCATCCTCATGATGCTTTCCTTCAGCTCCCCCAACTTGAAAGCCCGAAAGTTCCTCATTCATCCACCAGTTTGAGCTGCAGTTCAACTGTCCCCTATGCCTATGACAGCAACAACAATGGAAGTAGCATGCAGTCACCTAATTCACTGACTCAAGAAGAAAACATACCACATAATTCGGTTTGCGCAAACAATGATCAAGTCACGGATTGGCGAGTTCTTGATAAATTTGTGGCTTCTCAACTGAGCAATCACCAGCAAGATGCTTCCAAGGAAACCACTTATTCCAACGCGGCAGTTGTGCTCCATGTGGATGAACATATTACTATGCTAGCAAACGATCAATCCAGAAGGCCAGAAATTGCGCAGCAGGAATATGCCTCCACGTCCACCTCCAGTTGCCAGATTGACCTGTGGAACTGA 1068 0.4476 MNTFLHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCKIGAEEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRHCLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMTSVRKMGEYESPCWFEDQVSLMQELESAKPISHPYASNYHHHYYVPCKQELQLQYNMAHPHDAFLQLPQLESPKVPHSSTSLSCSSTVPYAYDSNNNGSSMQSPNSLTQEENIPHNSVCANNDQVTDWRVLDKFVASQLSNHQQDASKETTYSNAAVVLHVDEHITMLANDQSRRPEIAQQEYASTSTSSCQIDLWN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0360 355 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Dere09g0360 355 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Dere09g0360 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 268 - -
Dere09g0360 355 FunFam NAC domain-containing protein 16 160 - -
Dere09g0360 355 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Dere09g0360 355 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0360 Dere-ChrDere09 6375081 6376338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0360 1 353 NAC Transcription Factor Family AT1G62700 54.975 8.17e-138 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere09g0360 NAM 2.6e-37 No_clan