Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0358 ATGGCTGCCCTTAGCATTGGCATCGCTACGACAAGTGTTTCTGCTGCTTCTACTACTAGGCCGACTTCTACCCACTTCAGAACCAGAATTTCGTGTATTGGATGGGACCCCGAAGGCATTCTTGGGCCACCCAAAACCGGCCACCTTGCTAGACTGGAGTTTAAGAGACGGCTCGAGAGAGACGCAGAAGCCCGCGAAGCCTTCGAGCGTCAAGTCCGCGAAGAGAAGGAACGCCGTCAAGCTCTTCGTCAATCGCGGTTTGTTCCGGATACACTCGAAGAGCTGGTTGAGTACTTCCTTGACACCGAAGCTCAGGACATCGAATTCGAGATTGCGAGAATGAGGCCCAGATTGAATGAGGAATTTTTTTCACACCTGCAATTTGAGTTAGGACAACTTCGATTTGCTGTTTCAAAAACTCAGGACATGGAGGATAGACTGATTGAGCTGGAGGCCCTACAGAAAGCCTTGCAAGAAGGAACAGAAGCCTATGATAAGATGCAAATTGAACTTATTACAGCCAAGGCAAGCCTAACCAAAATTTTGACATCGAAAGATGTGAAAGCAACTTTACTAGAGATGGTTGAGCGCAATGAAATCAATAGATCCTTGTTGGCCCTTCTTGATGAAAACATAGCAAATGCACATAGGGGCAACCAGAAACAGGCAGCAGAATTCATGGAGAAGCTCCGTGGGGCAGTTCTCAAGTACATTACGTTGATGATTAACCGGAACTACAGGGCACATTGTGTTATTGTTGAAATTTGTAGCAGCACTGGATTCGAAGAGAATACAGTGAAGTCTGTATATTGCATAGACATGGCGAGACTTGGGTTGTCTTTACTGCTGCTGAATCTTGTCATTTACATGTCTGGGTCAGCAGAATCCGCCATTGCCAGACACTCCAACCCAACAGATTTCATAAAATCATCATGCAGAGCCTCTCGCTACCCTGTTCTGTGCGTTCAAAATCTCTTAGGCTATGCAGGAGTGATTGGCCAAAGCGAGCGACGACTAGCTATGACTGCTTTGTCGGTAAGCATATCCAGGGCTCGATCGTCGACGTCATTTGTGAAGACGGTATTGAGAGTAAGGGGTATAAAGCGTAGGGAATACAAAGCTGTACAAGACTGCATAGAGAACACGGGTAATAGTGTGGAGCGTCTAAGCCAATCGGTGAGGGAACTAGGCCATATGGGTGAGGACGCGGGTGGGGACTTCTTGTGGCGCATGAGCAACGTGCAGACTTGGGTTAGTGCAGCTCTCACTGACCAGAACACTTGTCTGGATGGCTTTGATGGTGCTGGCATGGATGGAAACGTCAAGACTGCCATTAGGCGCAGGGTCCTTCTTGTTGCTCAACTCACCAGTAATGCACTTGCATTGGTTAATCTCTTTGCGTCAAGGCACTGA 1413 0.4777 MAALSIGIATTSVSAASTTRPTSTHFRTRISCIGWDPEGILGPPKTGHLARLEFKRRLERDAEAREAFERQVREEKERRQALRQSRFVPDTLEELVEYFLDTEAQDIEFEIARMRPRLNEEFFSHLQFELGQLRFAVSKTQDMEDRLIELEALQKALQEGTEAYDKMQIELITAKASLTKILTSKDVKATLLEMVERNEINRSLLALLDENIANAHRGNQKQAAEFMEKLRGAVLKYITLMINRNYRAHCVIVEICSSTGFEENTVKSVYCIDMARLGLSLLLLNLVIYMSGSAESAIARHSNPTDFIKSSCRASRYPVLCVQNLLGYAGVIGQSERRLAMTALSVSISRARSSTSFVKTVLRVRGIKRREYKAVQDCIENTGNSVERLSQSVRELGHMGEDAGGDFLWRMSNVQTWVSAALTDQNTCLDGFDGAGMDGNVKTAIRRRVLLVAQLTSNALALVNLFASRH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0358 470 Pfam Plant invertase/pectin methylesterase inhibitor 306 462 IPR006501 GO:0004857
Dere09g0358 470 SMART PMEI_2 303 462 IPR006501 GO:0004857
Dere09g0358 470 Coils Coil 58 85 - -
Dere09g0358 470 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 306 466 IPR035513 -
Dere09g0358 470 PANTHER DIMETHYLALLYL, ADENOSINE TRNA METHYLTHIOTRANSFERASE 1 239 - -
Dere09g0358 470 FunFam Pectin methylesterase inhibitor 1 303 466 - -
Dere09g0358 470 Gene3D Invertase/pectin methylesterase inhibitor family protein 303 466 IPR035513 -
Dere09g0358 470 Coils Coil 150 170 - -
Dere09g0358 470 NCBIfam pectinesterase inhibitor domain 280 464 IPR006501 GO:0004857
Dere09g0358 470 CDD PMEI-like_3 310 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0358 Dere-ChrDere09 6334127 6338491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0358 308 463 Carbohydrate Esterase AT3G14310 29.878 2.06e-16 80.1