Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0323 ATGAGTTCTCAACAGAACGATGGCACGAGCTACCAGCCTTCAGAGACGAAGCCATGCGCCAACAATTGTGGATTCTTTGGGACTGCTGGCACCATGAACCTGTGCTCTAAATGTTACAGAGATTTCCAAATCAAGGAGCAGCAGGCCGCTTCCGCTAAGGCTGCCATGGAAAAATCTCTCAACCCTATATCTGTTTTCTCTTCTGATCAGACGCTGAAATCGACCCCTTCAGCGCAGTTCCTTTTTGGATCCTCTTCCTTTCCCTCTTCTTCTTCCGAATCATCGTCTTCATCGTCCGCCGTTTTCGGTGGCCATCAGGGACTGTCAAAGTCGGCGAATCGTTGTTGGAGTTGTAACAAGAAGGTGGGATTGACTGGATTCCTGTGCAAGTGTGGGAGCACTTTCTGCGGGACACATCGTTATCCAGAGAAGCACGAGTGTACATATGATTTCAAGGCTCCTGGCCGTGATGCGATCGCCAAGGCAAATCCTGTGGTTAAAGCCTTCAAACTAGACAGGAATTATATTGTTCTGCTGTTTGGTGTCATCAAGGGTGCAGCATGCATGGCACTCCAACTTACCAAGCGATGTGATGATGGGGTTAAATTCGTCAGTGACAGAAATGTTGCCCTCAGTGAGGAATGTGAATGTTACGAGCTTGATCATAGATCTTATGAAAGACTGCATAATTACCATGACATTAGGGTCGTTTGA 714 0.4734 MSSQQNDGTSYQPSETKPCANNCGFFGTAGTMNLCSKCYRDFQIKEQQAASAKAAMEKSLNPISVFSSDQTLKSTPSAQFLFGSSSFPSSSSESSSSSSAVFGGHQGLSKSANRCWSCNKKVGLTGFLCKCGSTFCGTHRYPEKHECTYDFKAPGRDAIAKANPVVKAFKLDRNYIVLLFGVIKGAACMALQLTKRCDDGVKFVSDRNVALSEECECYELDHRSYERLHNYHDIRVV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0323 237 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Dere09g0323 237 Gene3D - 85 170 IPR035896 -
Dere09g0323 237 Pfam AN1-like Zinc finger 115 151 IPR000058 GO:0008270
Dere09g0323 237 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 63 - -
Dere09g0323 237 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Dere09g0323 237 Gene3D - 1 62 - -
Dere09g0323 237 PANTHER AN1-TYPE ZINC FINGER PROTEIN 18 173 - -
Dere09g0323 237 FunFam Zinc finger AN1-type containing 6 89 170 - -
Dere09g0323 237 SMART AN1_Zf_4 115 152 IPR000058 GO:0008270
Dere09g0323 237 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Dere09g0323 237 SUPERFAMILY AN1-like Zinc finger 108 168 IPR035896 -
Dere09g0323 237 ProSiteProfiles Zinc finger AN1-type profile. 109 155 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0323 Dere-ChrDere09 6027760 6029830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0323 13 173 C2H2 Transcription Factor Family AT3G52800 45.342 2.98e-36 124