Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0318 ATGAGAAGGCATCGTCAATTTCATCTCCTGCATGCTCTCTTGTGCTCTATCCTTTGTCTTGTTTTATCTATCACGGTCTCACCAGCAACAGAAACGGAGATTTTGCTTCAATTTAAGGGTAACATTACAGATGATCCCCGAAACAGCTTGAGTTCATGGGTTTCAAGCGGAAACCCTTGTGTTGATTATAGGGGAGTTTTCTGTAACTCGGAAGGTTTTGTGGAAAGAATCGTACTCTGGAACACTAGTTTGGCCGGAGTATTGTCACCGGCTCTGTCGGGATTGAAATTTTTGAGGATTCTGACACTGTTCGGGAATCGGTTTTCGGGGAACATTCCAGAAGAATATGCTGACATTCACTCGTTGTGGAAGATAAATTTAAGCTCCAATGCATTATCTGGTTCAATCCCAGAGTTCATTGGCGACTTACAAAGTATCCGGTTTCTGGATTTGTCAAAGAACAGCTTAACAGGGGAGATACCATCGGCTTTGTTTAGGTACTGTTACAAAACCAGGTTCGTTTCTTTTTCTCGTAACAGTCTTTCAGGTTCAATTCCGGCGTCATTGGCGAATTGCTCGAACCTTGAAGGGTTTGATTTTTCTTTTAACAATCTAAGTGGGGATATTCCTTCGCGGCTTTGTGATATTCCAAGGTTATCCTATTTCTCCTTGAGAAGCAATGCCTTATCAGGGACAGTGCATGACCAGATTTTGGCATGCCAAAGTTTGACAATTTTAGATCTTGGTGATAATACATTTACTGGTTTGGCCCCTTTTAACATCCTTGAAATGAAAAATCTTACTTATTTCAATGTGTCGTATAACGGGTTTAGTGGACAAATTTCTGAGATGACTACCTGTAGTGAGAAATTAGAAGTTTTTGATGCTTCGGGGAATAAATTGGATGGGGAGGTTCCGTCAAGCATAACGAGATGCAAGAACCTCAAGCTACTGGCCTTGGAATTAAATAGGCTGAAAGGGATTATCCCAGGAGAAATTTCAGATTTGGGAAGGCTACTAGTTATTAAATTAGGTAATAATTCTATAAGCGGATCAATTCCGAAGGGTTTTGGCAACATTGAGCTGCTTGAAGTTCTGGATTTGCGCAATCTAAACCTTGTTGGTGAAATTCCCAATGATATACGCAACTGCAGATTCCTTCTAGAGCTGGATGTTTCTGGTAATAACTTAGAAGGAGAGATTCCTCAGAACCTTTACAACTTAGCAAACCTGGAGGTCCTTGACCTACATCACAATCAGCTCAATGGAAGCATCCCACCAGGCCTAGGAAACTTGTCAAAGATCCAATACCTAGATTTGTCACATAATTCACTTTCTGGTTCAATCCCTTCTTCCCTTGGGAATTTGAAAAACTTAACACATTTTAATCTCTCATCTAACAATCTCTCTGGTGTAATTCCATCTATTGCAACCATACAGAGTTTTGGTCCATCTGCATTTTCCAACAACCCTTTTCTCTGTGGTGCTCCTTTGGACACCCCTTGCTCGGCAAATGGCACTAGACCACAGTCAACTTTTGGGAAACCCAAAGTGCTAAGTGTCTCTGCAATTATTGCAATTGTTGCTGCAGCAGTAATTCTTACTGGTGTTTGTTTGGTGAGCATCATGAATATCAAGGCCAGCAGTAGGAAAAATGATGAGCACACGATGATTGTTGAGAGCACACCTCTTGGATCTACAGAATCAAATGTAATAATAGGAAAGCTGGTTCTCTTCAGCAAAAGTTTACCGTCAAAGTACGAAGACTGGGAGGCTGGTACCAAAGCATTGCTTGATAAAGAGTCTTTGATAGGTCGCGGATCAATTGGTACAGTCTACAGAACTGATTTTGAAGGTGGGATCTCAATTGCAGTGAAAAAGCTCGAGACATTGGGAAGAATAAGAAACCAAGATGAATTTGAGCATGAAATTGGGCGATTAGGTAACCTTCAACACCCTAATTTAGTTGCCTTTCAAGGTTACTATTGGTCCTCAACAATGCAACTCATTCTGTCGGAGTTTGTCCAAAATGGAAATCTGTATGACAATCTACATGGGTTTGGTTATCCTGGCCCCAGCACTAGCAGCGGCAATTGGGAATTAAATTGGTCTAGAAGGTATCAAATTGCAGTTGGAACTGCAAGAGCCATTGCATACCTTCACCATGACTGTCGACCTCCAGTTCTTCATCTCAACATTAAGTCCTCTAACATACTCTTAGATGACAAGTATGAAGCGAAGTTGTGTGATTATGGTTTGGGAAAGTTACTTCCCATTTTGGACAATTACGGTCTGACCAAATTCCACAACGCTGTGGGCTATGTTGCCCCAGAGTTGGCTCAGAGTATGAGACAGAGTGAAAAATGTGATGTGTATAGTTTTGGTGTCGTTCTTTTGGAACTGGTTACAGGGAGGAAACCTGTAGAAAGTCCAACAGCGAACGAGGTGGTGGTTTTGTGTGAGTATGTGAGGGGGTTGTTGGAGATTGGCTCAGCTTCACAATGCTTTGATACCAGGTTGCTGGGTTTTGCGGAGAACGAGTTAATTCAGGTGATGAGATTGGGGCTTATTTGTACTACAGAGGATCCTTCTAGGAGACCAAGTATGGCTGAGGTTGTGCAGGTTCTTGAGTCTATCAGAAATGGATTGGAATCAAATTAA 2661 0.4171 MRRHRQFHLLHALLCSILCLVLSITVSPATETEILLQFKGNITDDPRNSLSSWVSSGNPCVDYRGVFCNSEGFVERIVLWNTSLAGVLSPALSGLKFLRILTLFGNRFSGNIPEEYADIHSLWKINLSSNALSGSIPEFIGDLQSIRFLDLSKNSLTGEIPSALFRYCYKTRFVSFSRNSLSGSIPASLANCSNLEGFDFSFNNLSGDIPSRLCDIPRLSYFSLRSNALSGTVHDQILACQSLTILDLGDNTFTGLAPFNILEMKNLTYFNVSYNGFSGQISEMTTCSEKLEVFDASGNKLDGEVPSSITRCKNLKLLALELNRLKGIIPGEISDLGRLLVIKLGNNSISGSIPKGFGNIELLEVLDLRNLNLVGEIPNDIRNCRFLLELDVSGNNLEGEIPQNLYNLANLEVLDLHHNQLNGSIPPGLGNLSKIQYLDLSHNSLSGSIPSSLGNLKNLTHFNLSSNNLSGVIPSIATIQSFGPSAFSNNPFLCGAPLDTPCSANGTRPQSTFGKPKVLSVSAIIAIVAAAVILTGVCLVSIMNIKASSRKNDEHTMIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGRGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEHEIGRLGNLQHPNLVAFQGYYWSSTMQLILSEFVQNGNLYDNLHGFGYPGPSTSSGNWELNWSRRYQIAVGTARAIAYLHHDCRPPVLHLNIKSSNILLDDKYEAKLCDYGLGKLLPILDNYGLTKFHNAVGYVAPELAQSMRQSEKCDVYSFGVVLLELVTGRKPVESPTANEVVVLCEYVRGLLEIGSASQCFDTRLLGFAENELIQVMRLGLICTTEDPSRRPSMAEVVQVLESIRNGLESN 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0318 886 ProSiteProfiles Protein kinase domain profile. 598 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0318 886 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 168 505 - -
Dere09g0318 886 Gene3D Transferase(Phosphotransferase) domain 1 675 885 - -
Dere09g0318 886 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 675 885 - -
Dere09g0318 886 Gene3D Phosphorylase Kinase; domain 1 568 674 - -
Dere09g0318 886 Gene3D Ribonuclease Inhibitor 175 508 IPR032675 -
Dere09g0318 886 PRINTS Leucine-rich repeat signature 146 159 - -
Dere09g0318 886 PRINTS Leucine-rich repeat signature 408 421 - -
Dere09g0318 886 ProSiteProfiles Leucine-rich repeat profile. 410 433 IPR001611 GO:0005515
Dere09g0318 886 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Dere09g0318 886 SUPERFAMILY Protein kinase-like (PK-like) 599 877 IPR011009 -
Dere09g0318 886 SUPERFAMILY L domain-like 75 210 - -
Dere09g0318 886 SMART LRR_typ_2 408 432 IPR003591 -
Dere09g0318 886 SMART LRR_typ_2 456 489 IPR003591 -
Dere09g0318 886 SMART LRR_typ_2 143 167 IPR003591 -
Dere09g0318 886 SMART LRR_typ_2 336 359 IPR003591 -
Dere09g0318 886 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 28 167 - -
Dere09g0318 886 Pfam Protein kinase domain 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0318 886 Gene3D Ribonuclease Inhibitor 28 169 IPR032675 -
Dere09g0318 886 SUPERFAMILY L domain-like 165 494 - -
Dere09g0318 886 CDD STKc_IRAK 604 879 - -
Dere09g0318 886 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Dere09g0318 886 FunFam Putative LRR receptor-like serine/threonine-protein kinase 575 674 - -
Dere09g0318 886 PANTHER OS05G0588300 PROTEIN 211 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0318 Dere-ChrDere09 5999995 6002739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0318 23 885 Receptor kinase-like Gene Family AT1G62950 65.865 0.0 1114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dere09g0318 Pkinase 4.6e-36 CL0016