Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0295 ATGACGTCGTCTCAGGAGCACGAGATGGATCAAGACGACGATGGCGGAACGTCCGACCTCAGCACCAGCGGCGGCGATCCTGAACGAGACCCTGCTGACTTCTCCACCGACAAAAACAATGGACCCTCGAAACAGACCGTCTCGGACGAAAGGACTGCTTTCCAGGTCTTGCCGTTGAAGGAGGAGCCCGTTGATTCGGACCCGCCGTCAGACCAAGAGCAAAAGACGCATCCACCCTCGCCGGCTCCGATTGGGGTTGTTCCTGTGGCGATGCAGATGCAAATGCCTTTAACCATGCCCATGCCCATGCCGGTCACTACGGCCAGACGCTCCTCCACCAAGGACCGTCACACGAAGGTGGAGGGCCGTGGACGTAGGATCCGAATACCCGCCACTTGTGCCGCTCGGATCTTTCAGCTGACCCGGGAGTTAGGCCACAAGTCCGATGGCGAAACCGTACGGTGGCTGCTCGAACACGCCGAGCAGGCCATCATCGAGGCTACTGGCACAGGCACCGTTCCGGCCATCGCTGTCTCCGTCGGGGGAACTCTGAAGATTCCCACAACGTCTAGCGCCAACAACAATCCGGATTCCGAACTCAGGAAGAAGCGTAAACGGCCGTCGAATAGCGAGTTTGTGGACGTGAGTGAAGCTGTTTCACAATCTTCAGGTCTGGCCCCGGTTCAATCGGCGTTACCGCAAGGTCTTGTACCCGTGTGGGCAGTGGGCAACACTAATATGATGATTCCGGCCAACGCCTTTTGGATGATCCCACCGGCGACGACGACCCCAGTGGGTGGAGTTACAGGATCGTCGAACCAGCAACCTCAGATATGGGCTTTGTCTCCGACGGTGACCCCCGTATTCAACATGTCGGCGAGACCCGTATCGTCTATGGTGGCAGCAACAAATATGTCGAGCGGCATCGAAGTTACGCCGGCGAGATGCAACAATTCATCGAACTCAGCGGCAGTGAGTACGAGCACGGTGGGGCCGACGGTAGCGAAGAAGTCGACGATGGCACCAAGTGTTAGTTGTAGCGGAGCGACAGGTAGTAGTAGTAGCGGCAGCGGCAGCGGTAGCAAGGCTCAGATGTTGAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGCTGCAGTTGATGGGGCGGTCAGGGAATAAACAAGCAAGAGTGAGAAAGTTAAGGAGAAAGAGAAAGGTTATGGTGTTGCCCATGAGCCACCACTCGCACGCACAATCCCACTCCCTCAGGGCTCAGGCCGTCAGTTATATGGATGAGACCAAAATCAATTCAAGTGCAATTGCAAATGGGCGTGTGGCGTTTCCAAGGGTTTCTGTGGGGTCCAATTACCCCACTTTAGACAGGTTTCCCCTATTAATTGGCTGTGGTCTTGCTCTGGATCATTACTATTACTGTTATCATGGATAA 1431 0.5514 MTSSQEHEMDQDDDGGTSDLSTSGGDPERDPADFSTDKNNGPSKQTVSDERTAFQVLPLKEEPVDSDPPSDQEQKTHPPSPAPIGVVPVAMQMQMPLTMPMPMPVTTARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSANNNPDSELRKKRKRPSNSEFVDVSEAVSQSSGLAPVQSALPQGLVPVWAVGNTNMMIPANAFWMIPPATTTPVGGVTGSSNQQPQIWALSPTVTPVFNMSARPVSSMVAATNMSSGIEVTPARCNNSSNSAAVSTSTVGPTVAKKSTMAPSVSCSGATGSSSSGSGSGSKAQMLRDFSLEIYDKQELQLMGRSGNKQARVRKLRRKRKVMVLPMSHHSHAQSHSLRAQAVSYMDETKINSSAIANGRVAFPRVSVGSNYPTLDRFPLLIGCGLALDHYYYCYHG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0295 476 Pfam TCP family transcription factor 112 192 IPR017887 -
Dere09g0295 476 MobiDBLite consensus disorder prediction 187 211 - -
Dere09g0295 476 MobiDBLite consensus disorder prediction 1 86 - -
Dere09g0295 476 MobiDBLite consensus disorder prediction 100 122 - -
Dere09g0295 476 ProSiteProfiles TCP domain profile. 113 167 IPR017887 -
Dere09g0295 476 MobiDBLite consensus disorder prediction 197 211 - -
Dere09g0295 476 MobiDBLite consensus disorder prediction 36 52 - -
Dere09g0295 476 MobiDBLite consensus disorder prediction 336 362 - -
Dere09g0295 476 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 376 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0295 Dere-ChrDere09 5745091 5747134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0295 109 387 TCP Transcription Factor Family AT2G45680 48.852 1.71e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere09g0295 TCP 4.3e-28 No_clan