Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0289 ATGGCTTCTTATGGTAAACCCTTGAGTGATCAAATGCTGACCGCCAAACATCTTCGAAGGGCTTCCAATATGCTGCTTAAAGATTATCTCAGGGACGATCTGAGTTCCTGCTCATCCAGCGGTTTCAAATCGCTTCCGCGCCGACAGTGCTGCACTACCGTCCGATTTGATCTCCTCGAGAAAGATCTCCAAGCCAAACGGAATCAACTCCTTCGATCTAGTACCAGTAAGCGGCGTTCTTGTTCATTCAAGACGGCTTCCTTCACCATATCTGCTCTGCACAAGGCTTCACGAGCGGTAATCAACGCCGTCAAATTACTTCCGTTTCCCTCCATATCCGCAACCCCATCTTCGTCCCAGGAAAAGAAATCCAAGAGGCGTCTCCTTTCTAAGAGTTTGTCACGGAAAGTGTTAAGCAGAAGCTTCTGGAGAAAAGCAGTTAAGGAAGCTGAGGGAAGTAGTGAGCCCCGACGGTGGAGATCATTCAGGGAGTTCCTGCTGGAAGAAGGAGATAAAGCGTCGGATCAAAATACAGAAAGCTCGAACACTAATAGCGTGACATTGGGAAGCAGTAGCTGTGGTTCAGGGATCAGCGCTAGCAGTAGTGGAAGTAGCAGGAAGAGTAGCGGAAACAGCTGGGTGTCGAGCGAATTAACGTGGGAGATATCAAGGTCATCGAGCGGTAATTCCACCGAGAACGACGTCGCAGTGAGTAAAGAGAATACGCCGCATAAAAGTAACCCCAAGACCGGTGAGGATTCCACCGACGGCTGCACCATAGAGAAAGCAATGGATTGGGCAAGTGAGGAGAAGGAACAATTCAGTCCTGTGTCGGTACTAGATTGCCCGTTTGGAGACGATGAAGATATCAACTCACCTTTGGATTCTACCTGTTCTGGCGCGGAAGGTCGTGCTGTTGCTGCAGCATGCAAACACAAGCATACGCACAAGACTCGACATTTTGATTGCATGGCATCACTGAAACCATTGGACTTAGAGAATCGAATGGCAATGTTTTCAGAAACGGAGGATGAACCATACAAGCCTCTGGAGAATGAGAAGAGCAAGGCCGACGAAACAGCGTGGAGGCTGGTGAACGAGGTTGAAAGCTCATTGCCGACCATGAGTAAGGCAGAGAAGAAGCTGCTGTTTGATTTGTTCAATGAGGAAACTACTGAGACTGCAGAGAAGGAAGGCAACAAGATAGCAGAGGAATGGATAGGTGGGGGATCCAGAGAAGTGAATATGGGTTCGGAAATTTGTATTAAGGAGATGGACGAGTGTGGGAGATGGACGAATATTTCAGAGGAAGAAGGTCCAGAAGTAGGGATGGAGCTGGAATTAGAGGTTTTGACTACTTTGGTGAACGAGCTCGTGCTTGAACTCGCATCCTGA 1395 0.4846 MASYGKPLSDQMLTAKHLRRASNMLLKDYLRDDLSSCSSSGFKSLPRRQCCTTVRFDLLEKDLQAKRNQLLRSSTSKRRSCSFKTASFTISALHKASRAVINAVKLLPFPSISATPSSSQEKKSKRRLLSKSLSRKVLSRSFWRKAVKEAEGSSEPRRWRSFREFLLEEGDKASDQNTESSNTNSVTLGSSSCGSGISASSSGSSRKSSGNSWVSSELTWEISRSSSGNSTENDVAVSKENTPHKSNPKTGEDSTDGCTIEKAMDWASEEKEQFSPVSVLDCPFGDDEDINSPLDSTCSGAEGRAVAAACKHKHTHKTRHFDCMASLKPLDLENRMAMFSETEDEPYKPLENEKSKADETAWRLVNEVESSLPTMSKAEKKLLFDLFNEETTETAEKEGNKIAEEWIGGGSREVNMGSEICIKEMDECGRWTNISEEEGPEVGMELELEVLTTLVNELVLELAS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0289 464 MobiDBLite consensus disorder prediction 176 244 - -
Dere09g0289 464 MobiDBLite consensus disorder prediction 170 257 - -
Dere09g0289 464 PANTHER OS04G0572500 PROTEIN 18 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0289 Dere-ChrDere09 5666382 5669047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0289 19 463 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 30.165 5.13e-40 147