Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0278 ATGGGTAAGGCATCAAAATGGTTTAGTGGTCTTCTCGGTCTAAAAAAGCCTGACTCTCCCACTCCTACTGCCTCGGTTCCAAGACCACCCAAAGAGAAACGAATGTGGAGCTTCGTCAAATCTTACAGACAAAACGATAACCACCATGCCACCACTATCAAAACTGGGATCGTGAATAATCTCAATCATACGGTCGCCACGACGGAGGCAGGCGTGGCTGCAGCCGCCGTAGTCAGACGTAGTACCAGTGGCAGGTGCACCGGAGCCACGGCAGAGGGCACCGCAAATCGTGAAGAATGGGCGGCCGTTAAGATTCAAGCCGCTTTTCGCGGCTGCTTGGCAAGGAGAGCACTGCGGGCATTGAAAGGATTGGTAAAGCTGCAGGCATTGGTGAGAGGTCATATGGCGAGGAAGCGAACGGCTGAGTGGCTGCAAAGAATGCAAGTGCTCTTACGAGCTCAGGCACGAGTCCGTGCAGGGTGGCTGAGCTCATCTTCGATTGCTAAGTCATCAAAAGTCCACTTCCATGGTCCAGCAACACCGGACAAATTTGAAAACCCAATCAGATCCAAGAGCATGAAATATGATCAGTCATCAATCCTCAAGAGAGATGATTCCAGATCCTATATCCAGATCAGTGGCAACAAAGAGAAATGTTGGAATACAACAGATAGCTGGGTAGATGAAAAATCATGGAATCGACGAAGATCATCCATAAGAACATGTGTGGACGATGAAAGAAAAGTAAGGATCCTCGAAATGGATTCTGGAAAACACAACTTAACACCAAAACGCAGGGCCAGAAGCCTCTTCCAGTCCACTAATCATGCTTTAGTTTCTGATCATTATAGTCAGAGTTTGACCATCACAAAGGACTCAACAACTCATCAGTCAGGTCCAATTCATTGTTACGAAGCTCAGCAATCTTACAGACCACTAGTGGTGCATGAGGTTGAGGAGACCCCCTTCTGCACAGCGAACAACAGTCCTCAATTTTTTTCTGCGTCATCTAGTGATGGTGGCTCCAAAAGAAGTCCTTTTACCCCTACCAGGAGTGACGGTTCAAGAAGCTATCTAAGTAGTTATTCTGACTGCCCAAGTTACATGGCTTACACTGAATCTTCCAAGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGTCAAGGTATGAAGGGTCTGGTTCTTCTAACAGGTACTCAACTTATGGATTTGGTGAATCTAAAGTGACCGCACAGAAGGCATCTGCTTTGCATGCAAGCTTCACTAACAAAGCTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGCGGGATATAGATACTGA 1335 0.4719 MGKASKWFSGLLGLKKPDSPTPTASVPRPPKEKRMWSFVKSYRQNDNHHATTIKTGIVNNLNHTVATTEAGVAAAAVVRRSTSGRCTGATAEGTANREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHMARKRTAEWLQRMQVLLRAQARVRAGWLSSSSIAKSSKVHFHGPATPDKFENPIRSKSMKYDQSSILKRDDSRSYIQISGNKEKCWNTTDSWVDEKSWNRRRSSIRTCVDDERKVRILEMDSGKHNLTPKRRARSLFQSTNHALVSDHYSQSLTITKDSTTHQSGPIHCYEAQQSYRPLVVHEVEETPFCTANNSPQFFSASSSDGGSKRSPFTPTRSDGSRSYLSSYSDCPSYMAYTESSKAKVRSLSAPKQRSRYEGSGSSNRYSTYGFGESKVTAQKASALHASFTNKAYPGSGRLDKLGMPAGYRY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0278 444 PANTHER IQ-DOMAIN 5-RELATED 1 401 - -
Dere09g0278 444 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Dere09g0278 444 MobiDBLite consensus disorder prediction 10 32 - -
Dere09g0278 444 MobiDBLite consensus disorder prediction 379 398 - -
Dere09g0278 444 ProSiteProfiles IQ motif profile. 122 148 IPR000048 GO:0005515
Dere09g0278 444 SMART iq_5 97 119 IPR000048 GO:0005515
Dere09g0278 444 SMART iq_5 120 141 IPR000048 GO:0005515
Dere09g0278 444 MobiDBLite consensus disorder prediction 334 358 - -
Dere09g0278 444 Pfam IQ calmodulin-binding motif 125 139 IPR000048 GO:0005515
Dere09g0278 444 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Dere09g0278 444 Pfam Protein of unknown function (DUF4005) 329 420 IPR025064 -
Dere09g0278 444 Gene3D - 95 149 - -
Dere09g0278 444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 145 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0278 Dere-ChrDere09 5531992 5534889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0278 1 64 IQD Protein Family AT4G23060 42.029 2.87e-07 50.8