Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0260 ATGAAGTTCCGTGCTTCATTATTGTTACTCAGTCTAATTTTTACGGTCTCTTTTGTGACTTGTGATACTGTGCCCTCAACTGAAGTTTGGGCGCTTACAACCTTCAAAGAGGCTATATATGAGGACCCATATCTAGTTTTGTCCAATTGGAATACGCTGGATTCAGATCCTTGTGAATGGTTTGGCGTTTTTTGCACAGCGGCTCGTGATCATATCATTAAGCTAAACATTTCAGGGTTATCTTTAAGGGGATTTCTTTCACCAGAATTGGGACGAATCACCTACTTGCAAGAACTGATTTTGCATGGCAACAATCTGATAGGAACGATACCTAAAGAATTGGGCATGTTGAAATCTCTCAAGGTCTTAGATTTGGGGAAGAATCAGTTATCTGGACCAATTCCTCCAGAGATTGGAAATCTAGCGCAAGTTGTGAAAATAAACCTGCAGTCCAACGGGTTGACTGGTAGGCTACCTCCAGCGCTTGGAAATTTGGGATACCTTCAAGAACTTAGGCTGGACAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGCATTTCGAGTTTTAAACCAAATATGCGTGGAATGTATGCCTCAAATTCCAATTTAACTGGTTTCTGTCGTTCGCCTCATTTAAAGGTTGCAGATTTTTCGTATAACTTCTTTGTTGGTAGCATACCCAATTGCTTGGTATATCTACCAAGGTCGAGCTTTCAAGGGAACTGCCTCCAGAGCAAAGAATTGAAGCAGCGTTCTTCAGGGGAATGCGCTGTTGCTTCACCTGCCAAGAGCCATGCTGTGGCCAACCCAAAGCACCGACCTGCTGAAGATGTGTCCAAGCATCATGGAGCATCCAAACCTGCCTGGCTTTTGGCTCTAGAAATAGTGACAGGAACCATGGTTGGTTCTCTCTTTCTGGTTGCTGCTCTCGCTGCTCTTCAGAAATGTAACAACAAATCATCTATCATTAATCCTTGGAAGAAATATGCAAGCCAGAAGGACCAAATGACAGTGTATATAGACTCTGAGATGCTGAAGGATGTAAGGAGTTACAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATCATTGGGTCTTCACCAGATAGTGTAGTCTACAAGGGCACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATTAAGGAGGAGTATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCGGACTTGGCAAGGTTAAATCATGAGAATGCCGGAAAGCTACTGGGATACTGTAGAGCAAGCACCCCATTTACAAGGATGCTGGTTTTTGAGTATGCTTCAAATGGGACACTCTATGAGCACTTACATTATGGAGAAGGATGCCAGTTATCATGGACACAGCGTATGAGAATTATTATAGGCATTGCTTGTGGACTCAAGTATCTACACACAGAAGTTGATCCTCCGTTCACTATATCAGAGCTGAATTCTAGCGCTGTATACCTCAGAGAAGATTTTTCCCCTACGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGGTCAGAAAAGAATTCTGATTCTGTTGGGAGCCAAGGTGCTGTTTGTGTTCTTCCACATTCCCTGGAGGCACGTCGTCTTGATCCCCAAGGAAATGTATATGCTTTTGGCATACTTCTATTGGAGATAATCAGTGGGAGACCTCCATATTGCAAGGATAAAGGGTCCTTGGTGGATTGGGCCAAGGAGTATCTAGAAATGCCAGAAGTAATGTCATATATGGTGGATCCTGAGTTGAAACATTTTAGATATGATGACCTTGCAGTAATATGTGAGGTAATAAATCTCTGTATCAATCCAGACCCCACCAGGCGTCCATCCATGCCACAACTGTGTAGTATGCTGGAGAGCAGGATTGAGACATCACTGAGCGTGGAGCTCAAGTCTACATCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAG 1983 0.4362 MKFRASLLLLSLIFTVSFVTCDTVPSTEVWALTTFKEAIYEDPYLVLSNWNTLDSDPCEWFGVFCTAARDHIIKLNISGLSLRGFLSPELGRITYLQELILHGNNLIGTIPKELGMLKSLKVLDLGKNQLSGPIPPEIGNLAQVVKINLQSNGLTGRLPPALGNLGYLQELRLDRNKLQGPVPAGGISSFKPNMRGMYASNSNLTGFCRSPHLKVADFSYNFFVGSIPNCLVYLPRSSFQGNCLQSKELKQRSSGECAVASPAKSHAVANPKHRPAEDVSKHHGASKPAWLLALEIVTGTMVGSLFLVAALAALQKCNNKSSIINPWKKYASQKDQMTVYIDSEMLKDVRSYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEYWTGYLELYFQREVADLARLNHENAGKLLGYCRASTPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTQRMRIIIGIACGLKYLHTEVDPPFTISELNSSAVYLREDFSPTLVDFESWKTILERSEKNSDSVGSQGAVCVLPHSLEARRLDPQGNVYAFGILLLEIISGRPPYCKDKGSLVDWAKEYLEMPEVMSYMVDPELKHFRYDDLAVICEVINLCINPDPTRRPSMPQLCSMLESRIETSLSVELKSTSLAWAELALSS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0260 660 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Dere09g0260 660 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
Dere09g0260 660 MobiDBLite consensus disorder prediction 261 282 - -
Dere09g0260 660 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Dere09g0260 660 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Dere09g0260 660 SUPERFAMILY L domain-like 26 235 - -
Dere09g0260 660 Gene3D Ribonuclease Inhibitor 25 256 IPR032675 -
Dere09g0260 660 SUPERFAMILY Protein kinase-like (PK-like) 339 635 IPR011009 -
Dere09g0260 660 PANTHER PROTEIN MALE DISCOVERER 2 6 658 - -
Dere09g0260 660 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Dere09g0260 660 Pfam Protein tyrosine and serine/threonine kinase 366 634 IPR001245 GO:0004672|GO:0006468
Dere09g0260 660 ProSiteProfiles Protein kinase domain profile. 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0260 660 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0260 Dere-ChrDere09 5360383 5364465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0260 8 635 Receptor kinase-like Gene Family AT2G01210 28.000 5.14e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dere09g0260 PK_Tyr_Ser-Thr 2.1e-19 CL0016