Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0254 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGCCCTGCTTCATATCACATACATAGAGGAGGCATTGTTGGGTCTGTATCTGGAACACATATCGGAGGGTTTCAAGTACCTCCTGGGTTCAGACCAAACACCGGCATTCCGGCACAGTCAAATGTACGAGGCAACTCTATGGGTTCTACATTTTCAGTAGAGCCTGGTCGTACAAATAGTAGTCATGGTCATGGCATTAGCATTGGTTCTTCTCCTGGAGTACCTTCTTCAGGCGAACCTGGGAAGAAGAAAAGAGGGAGGCCCCGTAAATACGGTCCTGATGGACCCGTTTCTTTGGGACTGTCTCCAATGTCTGTCACTGCTAAGTCTACCCCTGCCTCGAGTACTCCGTCCCAGAAAGGAGCTAGAGGACGCCCTCCTGGAAGTGGAAGAAAACAGCAGCTAGCCACTCTAGGCGAATGGATGAACAGTTCAGCAGGACTGGCTTTTGCACCTCATGTTGTCACTATTGGAGCTGGGGAGGACATTGTAGCTAAGTTACTGTCAATTTCACAGCAGAGACCTAGGGCGCTGTGTATCTTGTCAGGCACTGGGACAGTTTCATCAGTTACTCTGCGTCAGCCTGCTTCTACTGTTGTCAGTGTCACTCTTGAGGGCCGATTCCAAATATTGCGCTTATCTGGTTCCTACTTGGTTGCTGAAGATGGTGGACTCCGCAACAGAACAGGTGGTGTGAGCGTTTCCCTTGCTAGTCCTGAAGGTCATGTTATTGGTGGTGGGGTTGCTGTGCTTATTGCTGCCAGCCCAGTGCAGGTGGTAGTGTGCAGTTTTATACATGGAGACTCCAAGACCAAGACTAAGCAAGTGAGTGCATCCAAGGACGAGAATTGTGAGGGCGAGCATGATGACAAGTTGGCTACTCCAGCGAGTGCTCCACCTACTCAAAACTATAACCAGTCAACAAGAGGCATATGGCCATCAGATCTGAAAAGCACACATAGTGGTATTGACTTGACGCGTGGATGA 1020 0.4971 MDGREAMAFSGGPASYHIHRGGIVGSVSGTHIGGFQVPPGFRPNTGIPAQSNVRGNSMGSTFSVEPGRTNSSHGHGISIGSSPGVPSSGEPGKKKRGRPRKYGPDGPVSLGLSPMSVTAKSTPASSTPSQKGARGRPPGSGRKQQLATLGEWMNSSAGLAFAPHVVTIGAGEDIVAKLLSISQQRPRALCILSGTGTVSSVTLRQPASTVVSVTLEGRFQILRLSGSYLVAEDGGLRNRTGGVSVSLASPEGHVIGGGVAVLIAASPVQVVVCSFIHGDSKTKTKQVSASKDENCEGEHDDKLATPASAPPTQNYNQSTRGIWPSDLKSTHSGIDLTRG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0254 339 Gene3D - 163 295 - -
Dere09g0254 339 MobiDBLite consensus disorder prediction 114 133 - -
Dere09g0254 339 ProSiteProfiles PPC domain profile profile. 155 297 IPR005175 -
Dere09g0254 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 311 IPR039605 GO:0003680
Dere09g0254 339 MobiDBLite consensus disorder prediction 307 339 - -
Dere09g0254 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 279 - -
Dere09g0254 339 MobiDBLite consensus disorder prediction 287 303 - -
Dere09g0254 339 CDD DUF296 163 275 IPR005175 -
Dere09g0254 339 MobiDBLite consensus disorder prediction 35 144 - -
Dere09g0254 339 MobiDBLite consensus disorder prediction 45 85 - -
Dere09g0254 339 MobiDBLite consensus disorder prediction 287 339 - -
Dere09g0254 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0254 Dere-ChrDere09 5333086 5335994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0254 1 339 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.871 5.99e-95 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0254 09 5333086 5335994 Dere09g0254 09 5333086 5335994 ECH