Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0252 ATGAAGACATGTGGTGCATCGAGGAAGATGGCAAGGACTTATGGAGCAATCATTCCTCCGAAGATGCCTAGAAGGATGAGACAGGTAAGTGGTTATTCTAGGCTCGGGTTCTACAAGAGGGACCTCTATAACCATATTGACAGAACAACCTGGTCAAGGTCTTTGGCATCCATTGGAACTATACTATTCCACCTTATGTCAAGAAGTGAGTTGCACATGGAGGAATTAATAGGGCATGCCAGCACAGAGCCTACAGAGAAGTGTGTCGATGCCATTGAGTCTGAAGTTCCAGTTGACCATGGTCTAAAGGATTCCAATACCATTGGGCCATCTGCTTCAGAGGTTCCTGGTCCGTCAACCCGACATCACACGGCTCCTTCAAAGTTCGAACGAGGCGAATGGTATGAATCGTTCGGCTTGTTGAGGATTGGTATGGGTTGTGAGTGTTCCAAGTTCTCATCCTGCTGCTGGGGAACAGAGCAAAATCGGCCAGTTCCTGAGGCCCATATTGATGAAAATGAAGAGAAGCGTGGAACTAATAATTTGCCGCCATTCCATGAATACACAATTGATCAACTTAGGAAGGCCACATCTGGATTTGCAGTAGAAAATATAGTTTCTGAGCATGGGGAAAAGGCTCCGAATGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCAAATTGCTGTAAAAAGATTTAATAGATCAGCCTGGCCTGATGCCAGGCAATTTTTGGATCAAGCCACGGCTGTTGGTCAGCTTAGGAACCAAAGATTAGCAAATTTACTTGGCTGTTGCTGTGAAGGTGATGAGAGGTTACTTGTTGCAGAATTCATGCCTAATGATACTTTGGCTAAACACTTGTTCCATTGGGAAACTGAACCTATGAAATGGGCAATGCGACTTAGAGTTGCTTTATACCTTGCCCAAGCTTTAGAATACTGTACCACCGGAGGACTTGCTCTATATCATGATCTCAATGCTTACAGAGTTCTCTTTGATGTTGAAGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACAAATCTGGCATTTACTCCACCTGAGTATCTTAGAACAGGTAGAGTTACTCCAGAAACTGTAACTTATAGCTTTGGCACCCTTTTGCTTGACCTCCTCAGTGGAAAACATATCCCTCCAAGCCATGCACTTGACCTGATTCGAGGCAGAAACCTTCAGATGCTAACAGACTCTTGTTTAGAAGGACAATTTTCAGATTATGAGGGGACTGAGTTATTGCGTTTAGCCTCACGATGTTTACAATCTGAACCACAAGAGCGTCCTAGTCCCAAGTCATTGGTCACTGCTTTAATACCATTACAAAAGGATTTCGAGGTTCCTTCTTATGTGCTTATGGGTATATCTCATGGTTCTACTGCTTTACCTCTGTCACCACTTGGTGAAGCTTGTCTTAGAATGGACTTGACTGCCATACATGAAGTCATAGAAAAGATTGGGTATAAAGATGATGAGGGTGTTGCAACTGAGCTATCATTCCAAATGTGGACCAACCAAATGCAGGAAACATTGAACTCAAAGAAGAAGGGTGATGCTGTTTTTCGACATAAGGACTTCAAAGCTGCAATTGATAGCTACACACAGTTCATTGATGTTGGAACCATGGTTTCTCCAACAGTTTATGCACGTCGAAGTCTGTCTTATCTCATGAGTGATATGCCTGAGGAAGCACTTAATGATGCATTGCAGACACAAACAATATCCCCTCTCTGGTACATTGCATCCTATTTACAAGCTGCTGCTCTTTTTGCCCTGGGCAAGGAGAATGAAGCCCGTGTGGCACTTAAAGAGGGTTCTACACTTGAAAATAAGAAGAACACAAATTAG 1896 0.4299 MKTCGASRKMARTYGAIIPPKMPRRMRQVSGYSRLGFYKRDLYNHIDRTTWSRSLASIGTILFHLMSRSELHMEELIGHASTEPTEKCVDAIESEVPVDHGLKDSNTIGPSASEVPGPSTRHHTAPSKFERGEWYESFGLLRIGMGCECSKFSSCCWGTEQNRPVPEAHIDENEEKRGTNNLPPFHEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMQIAVKRFNRSAWPDARQFLDQATAVGQLRNQRLANLLGCCCEGDERLLVAEFMPNDTLAKHLFHWETEPMKWAMRLRVALYLAQALEYCTTGGLALYHDLNAYRVLFDVEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPETVTYSFGTLLLDLLSGKHIPPSHALDLIRGRNLQMLTDSCLEGQFSDYEGTELLRLASRCLQSEPQERPSPKSLVTALIPLQKDFEVPSYVLMGISHGSTALPLSPLGEACLRMDLTAIHEVIEKIGYKDDEGVATELSFQMWTNQMQETLNSKKKGDAVFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMSDMPEEALNDALQTQTISPLWYIASYLQAAALFALGKENEARVALKEGSTLENKKNTN 631
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0252 631 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 155 629 IPR045845 GO:0004672|GO:0009742
Dere09g0252 631 Gene3D Phosphorylase Kinase; domain 1 173 278 - -
Dere09g0252 631 ProSiteProfiles Protein kinase domain profile. 203 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0252 631 Gene3D Tetratricopeptide repeat domain 524 631 IPR011990 GO:0005515
Dere09g0252 631 SUPERFAMILY TPR-like 530 625 IPR011990 GO:0005515
Dere09g0252 631 SUPERFAMILY Protein kinase-like (PK-like) 180 465 IPR011009 -
Dere09g0252 631 FunFam probable serine/threonine-protein kinase At5g41260 280 471 - -
Dere09g0252 631 MobiDBLite consensus disorder prediction 100 125 - -
Dere09g0252 631 MobiDBLite consensus disorder prediction 106 120 - -
Dere09g0252 631 Pfam Protein tyrosine and serine/threonine kinase 216 453 IPR001245 GO:0004672|GO:0006468
Dere09g0252 631 FunFam probable serine/threonine-protein kinase At4g35230 175 278 - -
Dere09g0252 631 FunFam probable serine/threonine-protein kinase At4g35230 524 631 - -
Dere09g0252 631 Gene3D Transferase(Phosphotransferase) domain 1 280 471 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere09g0252 Dere-ChrDere09 5301673 5315322 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0252 160 454 Glycoside Hydrolase AT3G07070 32.508 2.59e-40 150
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dere09g0252 PK_Tyr_Ser-Thr 5.8e-23 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0252 09 5301673 5315322 Dere09g0252 09 5301673 5315322 ECH