Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0233 ATGGTGCCAAAAACTGTTGTCATTGCTACTATAGGTTCTTTTAGAACTATTTTTGCTCTTTATTTCCAACAGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTTCTTCAAGAATATGGCCGGCTTGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTCTATCAGGTCTTGCATATTTACATGCAAAGAACACTGTCCATAGGGACATTAAAGGAGCAAACATATTGGTGGATCCTAATGGGCGGGTAAAATTGGCAGATTTTGGGATGGCAAAACATATAAATGGGCAGTCTTGTCCATTATCTTTCAAGGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCGAATGGTTGTAATCTTGCCGTTGATATATGGAGCCTTGGCTGCACTGTTTTGGAGATGGCTACAACAAAACCTCCTTGGAGCCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACAATTCCAGATCGTCTTTCAGAAGATGGAAAAGAATTTGTCAGGCTTTGTTTGCAAAGGAACCCCCTACAGCGTCCATCAGCTGCCCAACTGCTGGAGCATCCATTTGTTAATAATGCATCTCTCGAAAGACCCATTCTGACTGCTGATCATTCAGATGCACCGTCAGCTGTTACAAATGCTGCCATTGGAACTGCAAGGCATAAATCATGCATAGACTCGGAAGGGGGTGGTATCTATCCGTCTGGTGGCTTGAACATTGGTTCAAAATCAAGCCCACGTTTGCCTTCTAGATCACTGCATGCAAGTGGAAGGATGTCTCCCTCTCCAATATCAAGTCCTCACACTGCATCTGGTTCATCCACCCCAATGACTGGTGGTAGTGGTGCCATCCCATTCCATCAAGCAAAGCAGCCAGCTTTCTCATATGAAGGTGTTGATATGATACAAACTTCTCAAATCAGTTATTATTATGATCCAAAGCATGACCCTTTTTGGGGGATTCCACAGACTACTCATTCTAACCTGGACATAATGTCATTTGATAACGATGCTCTAGCATACCAGATAAAGAGACCTGTCCAGGGAGACCCAAGAAAATTTAATATTGGTCAGCCATGTTTGGCTGATTGCGTGTCACAGCAGCTGTTAAGAGATCATGCAAGGCTCAATTCATCCATAGATCTTAAGCCCAGTACCCCAATGCTTGGCCGCATAAATGGCCTATGGCCTATATCTCAATGA 1263 0.4276 MVPKTVVIATIGSFRTIFALYFQQVDDKLYIYLEYVSGGSIYKLLQEYGRLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHINGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDRLSEDGKEFVRLCLQRNPLQRPSAAQLLEHPFVNNASLERPILTADHSDAPSAVTNAAIGTARHKSCIDSEGGGIYPSGGLNIGSKSSPRLPSRSLHASGRMSPSPISSPHTASGSSTPMTGGSGAIPFHQAKQPAFSYEGVDMIQTSQISYYYDPKHDPFWGIPQTTHSNLDIMSFDNDALAYQIKRPVQGDPRKFNIGQPCLADCVSQQLLRDHARLNSSIDLKPSTPMLGRINGLWPISQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0233 420 Pfam Protein kinase domain 16 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0233 420 MobiDBLite consensus disorder prediction 256 301 - -
Dere09g0233 420 SUPERFAMILY Protein kinase-like (PK-like) 20 211 IPR011009 -
Dere09g0233 420 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 23 228 - -
Dere09g0233 420 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0233 420 SMART serkin_6 5 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0233 420 Gene3D Transferase(Phosphotransferase) domain 1 7 240 - -
Dere09g0233 420 MobiDBLite consensus disorder prediction 258 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0233 Dere-ChrDere09 5114397 5117431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0233 23 413 MAP Kinase Kinase Kinase AT1G63700 57.627 1.95e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere09g0233 Pkinase 9e-54 CL0016