Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0232 ATGCCGTCATGGTGGGGAAAGTCTTCCTCCAAAGAGGTGAAGAGGAAAGAAAATAGGGAAAGTATTATTGATACAATACAGCGCAAGTTTAAAAGCGCTTCTGAAGACAAGTGCAACAATAAATCAGGAGGTTCTAGGAAACATCTTACTGTCTCAGATAAGGGATCTAAATCGCTTGTACTTTCAAGATCAGCATCTCCCTCTACACATGTGTCCAGATGTCAGAGTTTTGCAGAAAGGCCTCATGCCCAACCACTCCCCCTGCCAGGGTTGCACCTTTCTGCCATCAGTCATACAAATTCTGTAATTAGTGTAGCATCAAAGCCAGAAAATTCCAGAGTATCTAAGCCATCTCTGTATTTGCCCCTGCCAAAACCTGGATGTGCTTCTAACCAGGGAGAACCTACTGATGCTGAGGGGGATATAGCCACTGCATCTGTTTCCAGTGACAGCTCTATTGACAGTGATGATCCATCTGATTCACGTAACCTTGGTCCTCTGGCATTTGACTGTGAAAATGTTAATAAAACCACCATTAACAGTTCCTTCTGCCGGGTGCACAAGGATCAATCATCTGTTCCTATTCCGAAGAACTCAAAAGCCTTGTCAAAACCAGTTTCTCAACTGTGCAATAATCAATCTTTATCTACCTCACCTAAAGGGGGGCCTCGGCATCTGAAGAATCTGCAAATAGCTCACCCAGCTGGTCTATGCAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCTAGAAGTCCTATGAGAGCATTTGGTCCTGAACAAGTTTTAAATGCTGGGTTCTGGACAGGAAAGCCATATTCTGATGTGGCTTCTGGACACTGCTCAAGTCCAGGCTCAGGTCATAATTCTGGGCATAACTCTGTCGCTGATCTGTTGGGACAGATGTTTTGGCCGCAAAGCAGGTGCAGCACTGAGTGTTCTCCAATACCTAGTCCCAAAATGACAAGCCCTGGTCCTAGCTCAAGGATACACAGTGGTGCTGTCACCCCTCTGCATCCACGGGCGAGAGGCATTGCAACAGAGTCACCTATAATACGTCCTGATGATGCGAAACAACAAAGTCATCGATTACCTCTTCCACCTATAACAATCAATAATTCTTGTCCTTTTTCTCCAACCTGTTCTGCGGCCACAACTCCTTCAGCGCCACGTAGTCCTAACAGAGCAGAAAATCCAACAAGCCCTGGTTCACGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGTCATGTGTATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTATTTTCAGATGATGCAAAATCAAGGGAATGTGCACAGCAACTTGGTCAAGAAATTACACTGCTAAGTCGCTTGTGGCATCCAAATATAGTTCAGTATTATGGATCTGAGACGGTATGTTAA 1434 0.4505 MPSWWGKSSSKEVKRKENRESIIDTIQRKFKSASEDKCNNKSGGSRKHLTVSDKGSKSLVLSRSASPSTHVSRCQSFAERPHAQPLPLPGLHLSAISHTNSVISVASKPENSRVSKPSLYLPLPKPGCASNQGEPTDAEGDIATASVSSDSSIDSDDPSDSRNLGPLAFDCENVNKTTINSSFCRVHKDQSSVPIPKNSKALSKPVSQLCNNQSLSTSPKGGPRHLKNLQIAHPAGLCSAPDSSMSSPSRSPMRAFGPEQVLNAGFWTGKPYSDVASGHCSSPGSGHNSGHNSVADLLGQMFWPQSRCSTECSPIPSPKMTSPGPSSRIHSGAVTPLHPRARGIATESPIIRPDDAKQQSHRLPLPPITINNSCPFSPTCSAATTPSAPRSPNRAENPTSPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRECAQQLGQEITLLSRLWHPNIVQYYGSETVC 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0232 477 MobiDBLite consensus disorder prediction 106 140 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 309 329 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 1 20 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 380 404 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 380 409 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 55 75 - -
Dere09g0232 477 Pfam Protein kinase domain 406 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0232 477 MobiDBLite consensus disorder prediction 145 164 - -
Dere09g0232 477 Gene3D Phosphorylase Kinase; domain 1 383 476 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 32 91 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 187 227 - -
Dere09g0232 477 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
Dere09g0232 477 ProSiteProfiles Protein kinase domain profile. 405 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0232 477 SUPERFAMILY Protein kinase-like (PK-like) 393 473 IPR011009 -
Dere09g0232 477 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 65 475 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 187 223 - -
Dere09g0232 477 MobiDBLite consensus disorder prediction 32 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0232 Dere-ChrDere09 5111044 5114168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0232 1 476 MAP Kinase Kinase Kinase AT1G63700 61.649 1.67e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere09g0232 Pkinase 9e-11 CL0016