Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0212 ATGGGATTTCCGGTGGGGTACACGGACCTTATCTTCCCCAAGATACTTCTGCACATACTTTCAATACTGGGTTTCATCAGAAAGCTCATTACCATACTCTTCCGCTATCTGGGTCTCCACGATTTCCTCGAACCTGACATTGCCTGGCCCGACCATTCTGCCCGGATACCCGAATTCCACTCGGTGTCAGCGATGTTGATCCGGGAAATCCTGCCGGTGGCCAAGTTCTCGGAGCTGGTGGACCCGCCGGAAAGCTGCGCCGTGTGTCTCTACGAATTCCAGGCGGAGGATGAGATCAGGCGACTCACGAACTGTAGGCACATATATCACCGGGGATGCCTGGACCGTTGGATGGGATACGATCAGAGAACTTGCCCCTTGTGTCGAACACCCTTCATACCCCACGATATGCAAGCAGCCTTCAACGACAGGCTCTGGGCTGCTTCTGGCATCCCTGAATTTTACGCTGATTCTGAAGAATATCCTCATCTAACTGCTTTTTAG 504 0.5258 MGFPVGYTDLIFPKILLHILSILGFIRKLITILFRYLGLHDFLEPDIAWPDHSARIPEFHSVSAMLIREILPVAKFSELVDPPESCAVCLYEFQAEDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYADSEEYPHLTAF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0212 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Dere09g0212 167 Pfam Ring finger domain 85 129 IPR001841 -
Dere09g0212 167 SUPERFAMILY RING/U-box 66 135 - -
Dere09g0212 167 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Dere09g0212 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 148 - -
Dere09g0212 167 SMART ring_2 86 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0212 Dere-ChrDere09 4905589 4906092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0212 1 150 C3H Transcription Factor Family AT1G63840 58.065 1.27e-60 183