Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0198 ATGGTACAACAGCGTGGGAGAAGTCGCAGAGGGTCTCGTATAGTTGCCGCCTCCTGCTGCCTTCGTCTACTCTTCCACCTCGCAACCATGATTATTCCAGAGAAGAACCGTCGGGAGATCTGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATCTGGCAAAACACCCCGACATTGATGTGCCGAATCTACAGGTGATCAAGCTGATGCAGAGTTTTAAGTCTAAGGAGTACGTGCGTGAGACATTTGCTTGGATGCACTACTACTGGTACCTCACTAACGATGGCATTGAGTTCCTTAGAACTTACCTCAATCTTCCTTCTGAAATCGTGCCTGCTACTTTGAAGAAACAAGCAAAGCCCGCTGGTAGACCTTTCGGTGGCCCACCTGGTGACCGCCCAAGAGGTCCACCTCGATTTGAGGGAGAACGGAGATTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGAGGGCCTGGTGGTGACTTTGGAGACAAGGGGGGAGCTCCGGCTGACTACAGGCCTTCGTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGTGCTGGTGGATATGGAGCGCCAACTAGTTCAAATCTTTCTTAA 624 0.5192 MVQQRGRSRRGSRIVAASCCLRLLFHLATMIIPEKNRREICKYLFKEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGAPTSSNLS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0198 207 Gene3D - 30 133 IPR036388 -
Dere09g0198 207 Pfam Plectin/S10 domain 32 123 IPR005326 -
Dere09g0198 207 MobiDBLite consensus disorder prediction 122 207 - -
Dere09g0198 207 MobiDBLite consensus disorder prediction 141 157 - -
Dere09g0198 207 PANTHER 40S RIBOSOMAL PROTEIN S10 30 201 IPR037447 -
Dere09g0198 207 FunFam 40S ribosomal protein S10 30 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0198 Dere-ChrDere09 4785470 4787547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0198 30 206 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.966 3.96e-77 228