Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0184 ATGGATGAATTTGCACGCTTGATGGACTGGGATTTGCAAGCTATTGTGAAAGGGTGCACCAGCGAAGCCCCAGAAGCCACCATCATAGACATCCCACACCCTAATTTTCCTCATTTCTGTTCTGAACAAGATCATGTTGATCTTCTCTGCAGTAATTTTCCTAAATTCTCAGATACCATTACGGTCCTCGATGAATTGGCGGAGCTTTACAAACCTTTTTACCCCGTTTTACACCCCCTTTCAACACAAACCCTCCCCACAACTTCCGTACCTATCCCTAAGGAAGTCAAAGCAAAAGAGGAATTACAAGACTTGCAAAATCCGGCAGTGCCTAAATGTAAGAAAAGCAAGAAAATCCAGAACAATAGGGTGGTGAAGCAGTTGACAGCAGATGGACTATGCGACCCATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGGTCCCCATATCCCAGAAGCTACTATAGGTGCAGCAGCGCTAAAGGATGCTTGGCGAGGAAACAGGTGGAAAGGAGCCATTTGGATCCCGGAGTTTTCATAGTTACCTATACTGCAGAACACAGTCACCATCACCCACCTCGCACCACCCGCAAAAATAGGCACTTATTTACACCTGATATCACTCAACATACCTCTTCTCCTTTGGAAGACTCCATTGAAGATGGGCTTGCGCCAAGTAGGCAAAGCCAGTACTTGAACACAGACCAAAACGTGCTTGAATTGTCCCAAGATGCTGAAGCCAGTGAGACTGTCACAGCCAGTGATGATTGGTTTCCAAGCCTAGAGGAACTCGACGAACTTGGCCAAGAATTTGCATTAGATGGTTGTCTTCAAGGCTAA 846 0.461 MDEFARLMDWDLQAIVKGCTSEAPEATIIDIPHPNFPHFCSEQDHVDLLCSNFPKFSDTITVLDELAELYKPFYPVLHPLSTQTLPTTSVPIPKEVKAKEELQDLQNPAVPKCKKSKKIQNNRVVKQLTADGLCDPWAWRKYGQKPIKGSPYPRSYYRCSSAKGCLARKQVERSHLDPGVFIVTYTAEHSHHHPPRTTRKNRHLFTPDITQHTSSPLEDSIEDGLAPSRQSQYLNTDQNVLELSQDAEASETVTASDDWFPSLEELDELGQEFALDGCLQG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0184 281 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g0184 281 Gene3D WRKY domain 114 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g0184 281 Pfam WRKY DNA -binding domain 135 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0184 281 FunFam WRKY transcription factor 22 117 187 - -
Dere09g0184 281 ProSiteProfiles WRKY domain profile. 128 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0184 281 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 227 IPR044810 GO:0003700
Dere09g0184 281 SMART WRKY_cls 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0184 Dere-ChrDere09 4633593 4634593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0184 1 201 WRKY Transcription Factor Family AT4G23550 42.857 6.09e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere09g0184 WRKY 6.7e-24 CL0274