LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g0139	ATGGAATTCTTACGCATTTTCTCTTCCATTTGCCTACTGAGTCTGATTTTCTGGCAAGGAAAAGCAGAGCCTATTGAAGATAAGCGAGCTTTGCTCGACTTTGTGAACAAATTCCCTCACTCTCGCTCCCTAAATTGGACTGACACATCTTCTGTGTGTACTAGTTGGACTGGAGTTACTTGTAACGAAGATAAGTCCCGAGTAATAGCCGTCCGATTGCCGGGTGTCGGATTTCATGGAGTAATTCCACCCAATACAATTGGCCGCCTCTCAGCGCTGCAAATTATGAGCCTCAGATCCAATCTTATCAGTGGGCATTTCCCTTCTGATTTTTCTAATCTTAAAAACTTATCCTTTCTCTATCTTCAATATAACAACCTCTCGGGTTCTTTGCCAGATTTTTCAGTCTGGAAGAATCTTACCATTGTCAATTTATCCAATAATCGTTTCAATGGCAGCATTCCTTTCTCAGTCTCTAATTTAACCGAGCTTGCTGGTTTGAATCTTGCAAACAACTCGCTTTCTGGTGAAATTCCTGATCTACACTTGCCCGGATTGCAACAGTTGAATTTGTCTAACAACAAATTGCACGGTAGTGTGCCTAAATCTCTCCATAGATTTCCTATGTCAGCATTCCTTGGTAATAACATATCTTTTGGAAGTTATCCTCACCTTTCTCCTGTTCTTCCTCCTGTTTTCAAGTCATCATCAAAATCTAAGAAACATGGAAGACTCGGTGAAACAGCACTATTAGGAATCATAACTGCTGCTGGTGTTCTTGGTCTCGTAGCATTTGGTTTTCTGATGTTTGTATGCTTCTCAAGGAGGGATGGAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCAGAGAAAGCTGTTTCGAAGAATCAAGATGCGAATAATAAACTGGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTACTGGGCAAGGGAACTTTTGGCACTGCATACAAGGCCATACTAGAGGATGCATCCACAGTAGTCGTAAAGAGGTTAAAGGATGTAGCTGTTGGAAAAAAGGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGAGAATGTGGTTGAACTTAAAGCATATTACTATTCCAAAGATGAGAAATTGATGGTATGTGATTACTACAGTCAGGGGAGCATCTCTTCTTTGCTGCACGGTCAAAGAGGAGAAGAAAGGGTGGCTTTAGATTGGGGTAGTCGACTTAAAATAGCCATAGGTGCTGCGAGAGGGATTGCTCGTATCCATGCTGAAAACGGGGGGAAGCTTGTGCATGGAAACATTAAATCTTCAAATATCTTCGTCAACTCTAAGCAGTATGGTTGTGTATCTGATCTTGGGTTGGCAATGATAATGTGCTCACTTGCCCTCCCCATCTCACGTGCTGCTGGTTATCGAGCACCTGAAGTTACAGACACCAGAAAAGCAGCACAACCTTCAGATGTTTATAGTTTTGGCGTGGTGTTACTAGAGCTTCTGACTGGAAAATCCCCCATCCTTACCGTAGGTGGGGATGAGATTGTCCACTTGGTGAGGTGGGTTCACTCGGTTGTGCGGGAGGAGTGGACAGCTGAAGTATTTGACTTGGAACTGATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTACAGATAGCCATGTCATGCGTGGTCAGGATGCCAGATCAGAGACCGAAGATGTCAGAAGTTGTAAAGATGATAGAAAATGTCAGGCAGCTTGATGCAGAGAATCGGCCACCACCTGAGAACCAAGCTGAAAGTGCAACACCACCCTCAGTGTCAATGACTCAACACTAA	1869	0.4329	MEFLRIFSSICLLSLIFWQGKAEPIEDKRALLDFVNKFPHSRSLNWTDTSSVCTSWTGVTCNEDKSRVIAVRLPGVGFHGVIPPNTIGRLSALQIMSLRSNLISGHFPSDFSNLKNLSFLYLQYNNLSGSLPDFSVWKNLTIVNLSNNRFNGSIPFSVSNLTELAGLNLANNSLSGEIPDLHLPGLQQLNLSNNKLHGSVPKSLHRFPMSAFLGNNISFGSYPHLSPVLPPVFKSSSKSKKHGRLGETALLGIITAAGVLGLVAFGFLMFVCFSRRDGDGFSGKLQKGGMSPEKAVSKNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVCDYYSQGSISSLLHGQRGEERVALDWGSRLKIAIGAARGIARIHAENGGKLVHGNIKSSNIFVNSKQYGCVSDLGLAMIMCSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPILTVGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQLDAENRPPPENQAESATPPSVSMTQH	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g0139	622	Pfam	Leucine rich repeat	81	127	IPR001611	GO:0005515
	Dere09g0139	622	Gene3D	Ribonuclease Inhibitor	136	229	IPR032675	-
	Dere09g0139	622	SUPERFAMILY	Protein kinase-like (PK-like)	327	591	IPR011009	-
	Dere09g0139	622	MobiDBLite	consensus disorder prediction	597	622	-	-
	Dere09g0139	622	PANTHER	OS05G0588300 PROTEIN	7	603	-	-
	Dere09g0139	622	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	398	604	-	-
	Dere09g0139	622	FunFam	Probable inactive receptor kinase RLK902	24	182	-	-
	Dere09g0139	622	SUPERFAMILY	L domain-like	38	207	-	-
	Dere09g0139	622	ProSitePatterns	Protein kinases ATP-binding region signature.	329	360	IPR017441	GO:0005524
	Dere09g0139	622	FunFam	pollen receptor-like kinase 1	292	397	-	-
	Dere09g0139	622	Gene3D	Phosphorylase Kinase; domain 1	289	397	-	-
	Dere09g0139	622	Gene3D	Transferase(Phosphotransferase) domain 1	399	612	-	-
	Dere09g0139	622	Gene3D	Ribonuclease Inhibitor	26	135	IPR032675	-
	Dere09g0139	622	ProSiteProfiles	Protein kinase domain profile.	323	594	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere09g0139	622	Pfam	Leucine rich repeat N-terminal domain	26	62	IPR013210	-
	Dere09g0139	622	Pfam	Protein tyrosine and serine/threonine kinase	327	590	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g0139	Dere-ChrDere09	4197645	4200620	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g0139	1	616	Receptor kinase-like Gene Family	AT4G23740	65.620	0.0	800

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Dere09g0139		Pkinase	3e-33	CL0016