Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0123 ATGGAACAGTTTCGGCATATAGGAGAGGTTGTTGGAAGTCTGAAAGCTCTAATGATTTTGCGTGACCAAATTCAAATCAACCAACGCCAGTGCTGTTTGATCCTTGATATCTTCACTTTGGCATTTGACACAATTGCATGTGAGATCAGGCAGAACCTTGTGCTGGAAGAGAGGAATACCAAATGGAAACCCCTCGAGTATCCTTTGAGAGAATTGTGCAGGGTGTTCAGAGAAAGCGAGCTTTACATCAGGCAATGCTTGGACTCCAAGGATTGGTGGGGTAAAGTCATCACCCTCAGTCAGAACAACGACTGCGTTGAGTTTCACATGCACAACTTGCTTTGCTATTTCCCTGCTGTTATTGAGGCCATTGAGATTGTTGGAGAGATGTCAGGACACGATCATGAGGAGATGAAGAAGAAGAAAGTTATGTTGGCAAGGAAGTACGACAGGGAATGGAATGACCCCGAGCTTTTCCAATGGAGATTCGGGAAGCAATATTTGGTTCCTCGTGAAATCAGCAAGCAATTGGAGAGCGCGTGGAGGGAAGACAGATGGAGGCTTATAGAATCACTCAAGGAAAAGAAAGCTTCTGCCAAAGTTGCTTTAACAAAGAACGAGCACCACCTTGCAGATATGCTCATTAAGAAATTGCTAAATGGGTCCGAGAAATTGAATAAGAAACTCTTTCCGAGTTCAATTCTGTTGGGCACTAAGGATTACCAAGTGAGACGACGATTAGGACAGGGAAGCGAGTTCAAGGAAATCCAATGGTTGGGACACAGCTTTGCCTTAAGACATGTGCATGCAGAGATGCATATGTCAGAAGCTGAGATTTGTACTCTGTTATCGCTTTCTCACCCCAACATATTGCAATACTTATGTGGGTTTCATGATGAGGAGAAGAATGATTATTTTCTTGTGATGGAGTTGATGAACAAGGATCTCGGGAGCTATATGAAGGACAACTGTGGTCCAAGGAGACAAATCTTGTTCTCTATCCCTGTAATGGTGGATCTTATGCTTCAAATAGCAAGAGGCATGGAGTACCTCCACTCTAGAAACATGTATCATGGCGATCTTAACCCTTGCAATATCTTACTCAAAGCTAGGAACTCCCAAGAAGGTTATTTTCAAGTAAAAGTAGCAGGCTTTGGTTCATCAGTGAAAGCCGAAAGTGGTATTACTAGCAGTCGGGCCTCACCATGCCAAAATCCCCTTCAAGAGGAGATCAATCCTTCCATTTGGTATGCCCCTGAAGTTCTAACTGAGCTAGAACGAAAGATCAAGAGTAATGCATGTAATTCTAGCTGTAAGTACTCCAAGAAAGCAGATGTGTACAGCTTTGGCATGGTTTGCTTTCAGTTAATGACAGGAAAAGTGCCTTTTGAAGATATCCATCTTCAAGGAGAACGGTCAAACCCAAAAATAAAAGCAGGGGAGCGGCCTCTCTTCCCATACCCTACACCGAAATACCTTGTCAGCCTGATTAAGAAGTGCTGGCATACTGACCCAACCCACCGTCCTACTTTCTCTTCGATCTGTAGGATTTTACGCTCTATAAAAAAATTCCTGGCTATCAATACTGAGTTTTTTGTCATCAATCCGGAACTCAATCTGCTTGAATTGACGTGTCCGCCAGTTGATTATTGTGACATAGAAGCATTGTTTCTCAAGAGCTTCCTAAAAAAGAAGGCTTCTCAGTTACCAAACGTATCACAAATACCATATGAAATGTTTGCTTATAAGATTGCAGAGAAAGAGAAGACTAGTTCAAGCACTAATAAAGATAACAGCTGTGAATCAGCAAAGGATGATGGCCCGACAAATGAACCCTTTGGCGACAAGGAAGAAAATGATACTGATGACCATAAGAAAGCCCCTGGAGATGAGAATGCCTCCACGGTGGACGATCCACCCGAACTAACGATGGATACAAAGTCAAGTTCTTCCGACTTACAGTCTGTTTGTTCCGAGGCTCATGTCAAGAAATCCGTAAGAATAAAACTACAAACAGAAGAAGAAACCAAGCAAGACCAAGGAAGTTTAAAGTTGCGGCCACAAAGATTGTCATCATCAACAAATCCACCTGGTCGCGGTTCAAGGTTGAACAAGGGGAATCAGTTGGCATTGGCATCAAGCCCTGGTAGAAATAGGTCTTCCCAAGCCGTAGATTCGAAGAACAGAGGGAGTCAATCACCATTAGTGTCCAATACTCGGAGTTCAATTAGAAGAAAAAGAAATGAGCGTGTCCCCGATCCAAAAAGCATTTTAAAGACGAAAACAGGGAACGAGTCACCATTGACGAAATATGGACGTGCCTCTGATTCTAAAAGCAGTTTACATAGGAAGAATGGGTATGAGTCACCATTGATAAGAAATATCCGTGTCTCGGATTCTAAGAGCAGTTTAAAGATGAAAAATGGGAATGAGTCACCATTGACGTCGAGCACAGAAAGGTTAAGACGTTCAAATACTGGTACCAGTTTAAAGATAAGAAGTGGGAACATGTCGCCATATGCAATGAGTCCTTTCAGTTTCAGCACATGCTCGAGAGGATGCGGCCATGTTTCAGACCATGATGACCTTTATAAGATGGGCAGTGGAAGAATATCGCCATTTGCATTGAGTCCGTTAAGCCCATATGTAAGAACTTATGGTCATGTCTCTCAATCTAAGAGAAGTTCTAAGATGAAAAGAGCGAGCTTGTCTCCGCTGGCATTGAGCCCTTTGAGTCCATATGCAAGAAGAAATGTCTACCTCCACGGAGGAGAGGCACAGCAAAAGTTCTCCTCTGAACCCATCATTTCGCAAGCAAGCTTCCACTCCCACGCTGTTGGAAAACTGACAATCGCATCAATCCGAAAGGCTGCGGGAGCTGTACTTCTCTTGACCATGTCTTCAGCCAAGGAACCTGACCCAACCCTTGGGTACCTGACTCGGAAAGACACTGAGGTGAAGCTTCCTCGACCTACAAGGGTTAAGAACAAAACCCCTGCTCCTGTCCAAATCACAGCAGAGCAGATTCTTCGTGAGGCTCGAGAGCGACAGGAAGCTGAGATCCGTCCTCCTAAGCAGAAGATTACTGATGCCACTGAATTAGGTGAGTATCGTCTAAGAAAAAGAAAAGAGTTTGAGGACTTAATCAGACGTGTACGATGGAACATAAGTGTCTGGATCAAGTATGCTCAATGGGAAGAGTCACAAAAGGACTTCAATCGTGCTCGTTCTGTTTGGGAAAGAGCCCTAGAGGTGGATTACAAGAATCACACACTATGGCTTAAATATGCTGAGGTAGAAATGAAGAATAAGTTCATAAACCATGCCAGAAATGTTTGGGACCGGGCAGTTACACTTTTGCCAAGAGTTGATCAATTGTGGTACAAATACATTCACATGGAGGAGATGCTCGGCAATGTGGCGGGTGCGAGGCAGATTTTTGAGAGGTGGATGAGTTGGATGCCTGACCAGCAGGGATGGCTCTCTTACATCAAGTTTGAGCTCAGATATAACGAAATTGAGCGAGCTAGAGGGATATTTGAACGATTTGTACTGTGCCACCCAAAAGTCGGTGCTTGGATAAGATATTCCAAGTTTGAGATGAAGAATGGGGAGGTGGCAAAGGCAAGAAATGTTTATGAGAGGGCGGTGGAGAAGCTGGCTGATGATGAGGAAGCAGAGCAGCTTTTTGTTGCATTTGCTGAGTTTGAGGAAAGATGTAAAGAAACAGAGCGTGCAAGGTGTATATACAAATTTGCCCTTGATCATATTCCCAAGGGAAGGGCCGAAGATTTGTATAAGAAGTTTGTGGCCTTTGAAAAGCAGTATGGGGACAGGGAAGGTATTGAGGATGCCATTGTTGGGAAGAGAAGATTTCAATATGAGGATGAAGTGAGAAAAAATCCCTTAAACTATGATTGCTGGTTTGACTATATAAGATTGGAAGAAAGTGTGGGGAATAAAGAAAGAATTAGGGAGGTCTATGAAAGAGCGATAGCCAATATTCCTCCTGCTGAGGAGAAGCGGTACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTGTATGAAGAGCTTTATGCTGGAGATATGGAGCGGACAAGAGATGTTTACAGGGAGTGTCTCAAACTCATCCCTCACCATAAATTCTCATTTGCAAAATTCTGGCTTCTAGCAGCCCAGTTTGAAATACGTCAGCTGAATCTCACAGCTGCTCGCCAAATATTGGGAAATGCAATTGGAAAGGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGGTGTAGAAAATTGTATGAGAAGTATCTGGAATGGTCACCAGAAAATTGCTATGCATGGAGCAAGTATGCAGAATTGGAGAGATCTTTATGTGAGACTGATAGAGCTAGAGCAATTTTTGAGCTTGCGATTGCCCAACCAGCATTGGATATGCCTGAGCTGTTATGGAAGGCTTACATTGACTTTGAGATTGCTGAGGGTGAATTTGAGAGAACAAGAGCACTTTATGACAGACTTCTTGATCGAACAAAGCATTTGAAGGTATGGATAAGCTATGCAAAGTTTGAGGCTTCAGCTATGGATGAGGATGGCAGGGTTTCAGACATGACAGATGATGATGTCCGGGCTTATCAACATGAACAAAAGAAGCAATGCATTCAGCGTGCTAGAAGGGTGTTTGAGAAAGCTGTTAACTACTTCAGATCATCGGCCCCAGAATTGAAAGAAGAAAGGGCAATGCTATTGGAGGAGTGGCTCAATATGGAGACTGCATTCGGCGAGCTGGGTGATGTGAGTTTAGTTCAGTCTAAACTGCCCAAGAAGCTCAAGAAGAGAAGGCCAGTAGCAACTGAAGATGGTCCTGCTGGGTTTGAAGAATACATTGACTACATTTTCCCAGACGAAGCCCAGACGACGAATCTCAAGATATTGGAAGCGGCCTACAAATGGAAGAAGCAGAAATTGTCTTCTGGCGACGACTAA 5013 0.4337 MEQFRHIGEVVGSLKALMILRDQIQINQRQCCLILDIFTLAFDTIACEIRQNLVLEERNTKWKPLEYPLRELCRVFRESELYIRQCLDSKDWWGKVITLSQNNDCVEFHMHNLLCYFPAVIEAIEIVGEMSGHDHEEMKKKKVMLARKYDREWNDPELFQWRFGKQYLVPREISKQLESAWREDRWRLIESLKEKKASAKVALTKNEHHLADMLIKKLLNGSEKLNKKLFPSSILLGTKDYQVRRRLGQGSEFKEIQWLGHSFALRHVHAEMHMSEAEICTLLSLSHPNILQYLCGFHDEEKNDYFLVMELMNKDLGSYMKDNCGPRRQILFSIPVMVDLMLQIARGMEYLHSRNMYHGDLNPCNILLKARNSQEGYFQVKVAGFGSSVKAESGITSSRASPCQNPLQEEINPSIWYAPEVLTELERKIKSNACNSSCKYSKKADVYSFGMVCFQLMTGKVPFEDIHLQGERSNPKIKAGERPLFPYPTPKYLVSLIKKCWHTDPTHRPTFSSICRILRSIKKFLAINTEFFVINPELNLLELTCPPVDYCDIEALFLKSFLKKKASQLPNVSQIPYEMFAYKIAEKEKTSSSTNKDNSCESAKDDGPTNEPFGDKEENDTDDHKKAPGDENASTVDDPPELTMDTKSSSSDLQSVCSEAHVKKSVRIKLQTEEETKQDQGSLKLRPQRLSSSTNPPGRGSRLNKGNQLALASSPGRNRSSQAVDSKNRGSQSPLVSNTRSSIRRKRNERVPDPKSILKTKTGNESPLTKYGRASDSKSSLHRKNGYESPLIRNIRVSDSKSSLKMKNGNESPLTSSTERLRRSNTGTSLKIRSGNMSPYAMSPFSFSTCSRGCGHVSDHDDLYKMGSGRISPFALSPLSPYVRTYGHVSQSKRSSKMKRASLSPLALSPLSPYARRNVYLHGGEAQQKFSSEPIISQASFHSHAVGKLTIASIRKAAGAVLLLTMSSAKEPDPTLGYLTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPPKQKITDATELGEYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMSWMPDQQGWLSYIKFELRYNEIERARGIFERFVLCHPKVGAWIRYSKFEMKNGEVAKARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLYKKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDCWFDYIRLEESVGNKERIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELYAGDMERTRDVYRECLKLIPHHKFSFAKFWLLAAQFEIRQLNLTAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLCETDRARAIFELAIAQPALDMPELLWKAYIDFEIAEGEFERTRALYDRLLDRTKHLKVWISYAKFEASAMDEDGRVSDMTDDDVRAYQHEQKKQCIQRARRVFEKAVNYFRSSAPELKEERAMLLEEWLNMETAFGELGDVSLVQSKLPKKLKKRRPVATEDGPAGFEEYIDYIFPDEAQTTNLKILEAAYKWKKQKLSSGDD 1670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0123 1670 Gene3D Transferase(Phosphotransferase) domain 1 221 531 - -
Dere09g0123 1670 MobiDBLite consensus disorder prediction 591 632 - -
Dere09g0123 1670 FunFam Kinase family protein 238 531 - -
Dere09g0123 1670 FunFam Cell cycle control protein 1086 1290 - -
Dere09g0123 1670 ProSiteProfiles Protein kinase domain profile. 241 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0123 1670 SUPERFAMILY TPR-like 1491 1599 IPR011990 GO:0005515
Dere09g0123 1670 MobiDBLite consensus disorder prediction 795 824 - -
Dere09g0123 1670 MobiDBLite consensus disorder prediction 639 658 - -
Dere09g0123 1670 FunFam Crooked neck pre-mRNA-splicing factor 1 1294 1446 - -
Dere09g0123 1670 FunFam Cell cycle control protein cwf4 1447 1652 - -
Dere09g0123 1670 SUPERFAMILY TPR-like 1046 1488 IPR011990 GO:0005515
Dere09g0123 1670 Pfam HAT (Half-A-TPR) repeat 1172 1200 IPR003107 GO:0006396
Dere09g0123 1670 Coils Coil 1206 1226 - -
Dere09g0123 1670 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Dere09g0123 1670 MobiDBLite consensus disorder prediction 591 824 - -
Dere09g0123 1670 Gene3D Tetratricopeptide repeat domain 1288 1486 IPR011990 GO:0005515
Dere09g0123 1670 Gene3D Tetratricopeptide repeat domain 1087 1287 IPR011990 GO:0005515
Dere09g0123 1670 Gene3D Tetratricopeptide repeat domain 1487 1580 IPR011990 GO:0005515
Dere09g0123 1670 MobiDBLite consensus disorder prediction 662 682 - -
Dere09g0123 1670 Pfam Protein tyrosine and serine/threonine kinase 271 517 IPR001245 GO:0004672|GO:0006468
Dere09g0123 1670 MobiDBLite consensus disorder prediction 742 756 - -
Dere09g0123 1670 SMART hat_new_1 1241 1275 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1171 1202 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1434 1466 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1468 1502 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1138 1169 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1561 1594 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1401 1432 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1285 1317 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1319 1353 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1036 1068 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1204 1239 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1070 1102 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1363 1399 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1504 1535 IPR003107 GO:0006396
Dere09g0123 1670 SMART hat_new_1 1104 1136 IPR003107 GO:0006396
Dere09g0123 1670 MobiDBLite consensus disorder prediction 759 775 - -
Dere09g0123 1670 PANTHER PRE-MRNA SPLICING FACTOR 989 1664 IPR045075 GO:0000398
Dere09g0123 1670 MobiDBLite consensus disorder prediction 683 741 - -
Dere09g0123 1670 SUPERFAMILY Protein kinase-like (PK-like) 231 532 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0123 Dere-ChrDere09 4050299 4061378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0123 276 518 MAP Kinase Kinase Kinase AT1G62400 31.148 5.54e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Dere09g0123 PK_Tyr_Ser-Thr 2.1e-35 CL0016