Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0112 ATGGAAAATGACATGAGCTGGGAGCAGAACATACTGACGAGCGAGCTAATTCAGGGAATGGAGGTAGCGAGAAAGTTGAGGGCAGATTTGCGGACACCATCTTCGGTAGAGACCAGGGATTTGCTGGTGCAGAGGATATTATCATCTTACGAAAAGGCTCTACTAATTCTAAAATGGAATGCTTCAAATGTCAAGCCTCTGCCCATGGGGGCAACTGTAGGATTGTCGCCAGAGTCTCCGATATCTGTCAACGCAAGTCCTCTGATGGACGACGTTGATGGGGACCAAAAGGATCATCCTGCTCTTAAACCCGACTCCAAGAAAAGGAAGATGATGCCCAGATGGATGGATCAAGTAAGAGTGAGCTCTGAGACTTCCCTCGAAGGACCTGAAGATGATGGCTACAGCTGGAGAAAATATGGACAGAAAGACATTCTGGGTACCAAATATCCCAGAAGTTATTATAGATGCACCTTCCGCAATACTCACAACTGCTGGGCCACGAAGCAAGTACAAAGATCAGATGAAGACCCCACTATATTTGACATCACTTACCGAGGAAGGCATACTTGTTCCCTGGGAAATAACGCTGTTCCACCACCTAGGTCTCCAGGCAAACAGGAGAAACCACATAATTATGAAAGTGTTGTTCACCATCAGCAGCCATTACAAGAAAGCCTACTAAAATTCAGATATAACTTGAGTGTCAATACGGATTACCTGGAGAACGAGGAGATGGCATATCCTATTACTTTCCCTTCAACTGCCTTTGGAAACATGGCACAAGAAATCCACAGCTTACTTCCCTTGGCACCAGAGAACGATTCCTTCTTGGGAAACCATTCCCAAACAGACTTGCTATCCCCGAACACGCCAGAATCAACCTATCTACCATCCCTGTCCTTCAAGATGACTGATTTCTGTGGCATCAAAAACCATCCATGCTCAGAATCTGACATTACTGAGATCATTTCGGCCAACACATCGGCCTGCAATTCTCCAATTGTTGATTTTAATTTCCCGATTGATCCAGTGGAAATTGATCCAAATTTCCCTTTTGACACTCCGGGACTTTTCACATAA 1083 0.4506 MENDMSWEQNILTSELIQGMEVARKLRADLRTPSSVETRDLLVQRILSSYEKALLILKWNASNVKPLPMGATVGLSPESPISVNASPLMDDVDGDQKDHPALKPDSKKRKMMPRWMDQVRVSSETSLEGPEDDGYSWRKYGQKDILGTKYPRSYYRCTFRNTHNCWATKQVQRSDEDPTIFDITYRGRHTCSLGNNAVPPPRSPGKQEKPHNYESVVHHQQPLQESLLKFRYNLSVNTDYLENEEMAYPITFPSTAFGNMAQEIHSLLPLAPENDSFLGNHSQTDLLSPNTPESTYLPSLSFKMTDFCGIKNHPCSESDITEIISANTSACNSPIVDFNFPIDPVEIDPNFPFDTPGLFT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0112 360 FunFam WRKY transcription factor 53 117 194 - -
Dere09g0112 360 Gene3D WRKY domain 117 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g0112 360 MobiDBLite consensus disorder prediction 192 211 - -
Dere09g0112 360 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g0112 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 221 IPR044810 GO:0003700
Dere09g0112 360 MobiDBLite consensus disorder prediction 82 114 - -
Dere09g0112 360 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0112 360 MobiDBLite consensus disorder prediction 91 114 - -
Dere09g0112 360 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0112 360 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0112 Dere-ChrDere09 3985698 3986996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0112 5 264 WRKY Transcription Factor Family AT4G23810 45.105 3.51e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere09g0112 WRKY 2.8e-26 CL0274