Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0111 ATGGATGATCACCACCCAAAACAGGCAACCTCTGAAGAAGTGAGCAGCAGCGAGTGGGAATTCATAGAGATGAGTGAGCAAGAGGAGGATCTCATCCACAGGATGTACAGGCTTGTCGGGAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGTAAAGCAGAAGAGATAGAGAGATTCTGGATTATGAAATATGGTGATGCTTTTGCTGTTCGAAGAATTCAACATAAACCCAATCACTCTTGA 249 0.4578 MDDHHPKQATSEEVSSSEWEFIEMSEQEEDLIHRMYRLVGNRWDLIAGRIPGRKAEEIERFWIMKYGDAFAVRRIQHKPNHS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0111 82 Gene3D - 24 65 - -
Dere09g0111 82 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 65 - -
Dere09g0111 82 FunFam MYB-like transcription factor 23 65 - -
Dere09g0111 82 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Dere09g0111 82 SMART sant 20 68 IPR001005 -
Dere09g0111 82 CDD SANT 23 62 IPR001005 -
Dere09g0111 82 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0111 Dere-ChrDere09 3981510 3983537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0111 24 62 MYB Transcription Factor Family AT5G52600 61.538 6.20e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere09g0111 Myb_DNA-binding 1.1e-06 CL0123