Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0038 ATGGATTCCGGCGCTAGTTTGTCTGTTGGCAAGTTCGAGACCGAGGATGTTGATGTGGAGATAGATCCAGCCCGGCGATACATTCGGTATGATGATATGTTGGGGAAAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGACGGAATAGAAGTTGCCTGGAATCAAGTGCATATTGAGGATGTTCTGCAGTCTTCGCAACAATTGGAGAGCTTATATTCTGAGGTCCATCTCCTGAAGTATTTGAAACATGAGAACATCATCAAGTTCTATAATTTTTGGGTGGACCATACAAACAAGACTATTAACATAATAACTGAGTTATTTACCTCCGGGAGTTTAAGGCAATATCGAAAGATACATAAGAATGTTAATATGAAGGCCATCAAGAACTGGGCAAGGCAAATACTTCGAGGTTTATGCCATTTGCACAGCCAGGATCCTCCTATAATCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAACAATGGAGAAGTTAAGATTGGAGATCTTGGATTGGCTGTTGTCATGCAGCAGCCCACTGCCCGGAGTGTTGTTGGAACACCAGAATTCATGGCCCCAGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGTATGTTAGAAATGATCACCTGTGAGTACCCATATAGTGAATGTAAAAATCCAGCGCAGATATATAGGAAAGTTACCTCTGGTATAAAGCCAGCTGCCCTTGCTAAAGTGAATGATCCGCAAGTAAAGCAATTTATAGAGAAATGTTTAGTTCCAGCATCTGTGAGATTGCCTGCATCTGAGCTGTTGAAGGATCCATTTCTTGCCACTGACAACAAAAAGGAGATCAGTCATAAACTGCTGTTGCCCATTCCCACAACCAAATTGGTGATTCCACCAACATCAGAGCCTCATACCATGGAGATAGACCTAAACTTCAAGGATGTTTTACCTGGCTCCTGTATTGAAGAAATTTCTCATGTCTCAGCTTTAGATTTCCTTCAGGTGAATGGGACTAATGAATTCAGGTCAAGAGGGAAGAAAAATGCTGCAGACAAAACGATTTCACTACGTCTGCGCATTGCTGATGCAAGTGGTCATGCAAGGAATATCCACTTTCCATTCTATCTTGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAGATCTAGATCTCCCTCATGAGGATGTGAGTGTTATTGCTGAACTAATAGACAACATGATTGTCAGGCTTGTGCCCAACTGGAGAGTGTCACGTCAATGCTTATCATCTGGAGAAGATTTTTTATACGCCCATTCTTCTCTAGTTCTGGAAGGGGGTTCATCTTTATGGTACCATATTGATGAGGATCTTGTTCACTCAAAGCTTCTTGATGAGGAAGATCAAGAGAAACAAGTGTCAGTTATGTCAGATATTTCAGCAGAGCATGGGTTAACAATCGCTTCAGATGCTAAAAGCTTAGAACCTGATTATTTTATTTGTGATGAACGCTGGGATGGCTCCAATGGCAACAGTTTCAATTCAGATGTCAGGTTATATGATCAAGATGCACGCAAGAGTGAAGCTAATGGTGGTGGATCTGTTAACATCAATGTGTCAGACAGGAACTCAGTAAACAATGAGTTGGAGAAGAACTCAACTATATCATTTATAAATTCATGTGGCGATGTATCCAATGACTTTGACATATCAAGCATCACTTCTCTCTCTCTCGCTGAGAAAAATCAATGTGACGAGCTGCAGCTGGAGCTTGATTCAATAGATATACGGTATCACCAACGCTTTCTTGAGCTTGTGAAGATAAGGGAGAATGCCATAGAAAGCGCGAAAAGGAGATGGATAACAAGGAAGAAAATATCAGTAATATGA 1908 0.403 MDSGASLSVGKFETEDVDVEIDPARRYIRYDDMLGKGAFKTVYKAFDEVDGIEVAWNQVHIEDVLQSSQQLESLYSEVHLLKYLKHENIIKFYNFWVDHTNKTINIITELFTSGSLRQYRKIHKNVNMKAIKNWARQILRGLCHLHSQDPPIIHRDLKCDNIFINGNNGEVKIGDLGLAVVMQQPTARSVVGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNPAQIYRKVTSGIKPAALAKVNDPQVKQFIEKCLVPASVRLPASELLKDPFLATDNKKEISHKLLLPIPTTKLVIPPTSEPHTMEIDLNFKDVLPGSCIEEISHVSALDFLQVNGTNEFRSRGKKNAADKTISLRLRIADASGHARNIHFPFYLDSDTAISIAEEMVEDLDLPHEDVSVIAELIDNMIVRLVPNWRVSRQCLSSGEDFLYAHSSLVLEGGSSLWYHIDEDLVHSKLLDEEDQEKQVSVMSDISAEHGLTIASDAKSLEPDYFICDERWDGSNGNSFNSDVRLYDQDARKSEANGGGSVNINVSDRNSVNNELEKNSTISFINSCGDVSNDFDISSITSLSLAEKNQCDELQLELDSIDIRYHQRFLELVKIRENAIESAKRRWITRKKISVI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0038 635 FunFam probable serine/threonine-protein kinase WNK9 111 290 - -
Dere09g0038 635 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 365 421 IPR024678 GO:0004674|GO:0005524
Dere09g0038 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Dere09g0038 635 SMART serkin_6 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0038 635 SUPERFAMILY Protein kinase-like (PK-like) 30 331 IPR011009 -
Dere09g0038 635 CDD STKc_WNK 26 285 - -
Dere09g0038 635 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Dere09g0038 635 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Dere09g0038 635 Pfam Protein kinase domain 32 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0038 635 Gene3D Phosphorylase Kinase; domain 1 11 109 - -
Dere09g0038 635 ProSiteProfiles Protein kinase domain profile. 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0038 635 Gene3D - 363 444 - -
Dere09g0038 635 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0038 Dere-ChrDere09 3307688 3310511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0038 1 634 MAP Kinase Kinase Kinase AT5G41990 50.000 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere09g0038 Pkinase 2.8e-51 CL0016