Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0034 ATGGGCAGAATGGGAAGAAATCGCACCAATTATTCTGCTAATCCCGCTGACTACAAGCTTCTCGAAGAGGTTGGTTATGGTGCTAGCGCCACCGTTTACCGTGCGATCTATCTTCCTCTTAATGAAGTCGTCGCCGTCAAGTGCTTGGATCTCGATCGCGTCAATTCCAATCTGGATGACATACGGAGGGAGGCCCAAACTATGAGTTTGATAGATCACCCTAATGTTGTGAGGGCATATTGTTCATTTGTTGTTGAACGAAATCTTTGGGTGGTCATGCCATTTATGGCTGAGGGTTCTTGTTTGCACCTCATGAAGATAGCATATCCTGAGGGATTTGAAGAGGCAGCTATCGGATCAATCCTAAAAGAAACTCTTAAGGCATTGGAGTACCTTCACCAACAAGGTCATATTCATCGTGATGTGAAGGCTGGAAACATTTTGCTTGATAGTAATGGGGTTGTGAAGCTTGCCGACTTTGGTGTTTCAGCTTGTATGTTTGATACGGGTGATAGACAGCGTTCAAGGAATACTTTCGTGGGGACTCCTTGCTGGATGGCACCAGAGGTACTGCAACCAGGAAGTGGTTACAATTCCAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTGGAGTTGGCTCATGGTCATGCTCCTTTTTCTAAATATCCTCCAATGAAGGTTCTTCTAATGACCATACAAAATGCCCCTCCTGGACTTGATTATGATCGCGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTCAAAGATCAAACAAAGAGGCCATCAGCGGAAAAGCTATTGAAGCATTCCTTCTTTAAATATGTTAAGCCTCCTGAGCTTTCTGTGAAGAAATTATTTGCTGACTTACCTCCTCTTTGGAATCGTGTAAAAGCTCTTCAGCTTAAAGATGCAGCTCAACTAGCTTTGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCACAGAGTGAATACCAGCGAGGAGTTAGTGCATGGAACTTTGATATCGATGATTTGAAAGCTCAAGCTTCATTGGTACGGGATGATGATGATGATATTGTGGAAATGAGAGAAGAAGATGAAAACAAATTCTTCACCAGTTATAAGGATGCAATTGATTCCCAGTCTGGCATGGGTAAAAATAATTCAGACAAATCACCACAGGATGAGTTCACATCACTAGTAGAAAGTAATGACATGAAACAGAGTGAGTTCTTGAACAAAAAGGGGAAGATTCTTGAAAGTGATCTCCAGGAACTTGGGCCCTCCAAAAATATTATATGGAAAAGAAATGGATCAATTACTGAGGCAACAGCATCCACCTCAGAGAAGGATATTGGGATAAGTAAGCCTAAAACTCAATCAGTGAAAAGTCGTCAAACCCAGAGTGGGCCGCTGGTGCCAGGAACTGTGTTTGGTCATTCTTTATCTGAAAGAGGGCGTACATTGGAGAGGTTTGAAAATGAAAATCCGCCATCAGGTGAGAAAAATAATCGTGAAGTACGGAGAGCTCCTAGCTTTAGTGGTCCTTTGATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATGTTCAGGAGGATTCAGAGATTCCTTGGATGAAAAGTCAAAGGCTAATCTTGTGCAAATTAAAGGGCGATTCTCAGTAACATCAGAAAATTTAGATCTTGTGAAGGATATACCTTTGAGTTCAGTTTCACGTCGATCTTCACAGGGATCGCCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTCTAAACAAATGCCTACTGGTCAGTACCCCAAAGACACTGCCAATAACAATATTCCTGCACCACTTCTTATGCCTCATCTGCAGAATCTTTTCCAGCAGACGTCTATTCAACAGGATCTTATAATGAATTTGTTGAATAGCATGCAACCAGCTGAAGCAGTAGATGCTTCGCTGAATGGAAAGTTGCCAGTACCACTACCTCGGAGTTCAGAGAACAATGGAAGTGTTGATTCAGCTACTTCAGATAGGGAACGTCTACTGCTTGTCAAAATTGCAGAACTTCGGGCCAGTATGATCAATTTGTCAGAGGAATTGGCTACTGAGAAGTTGAAACAGACGCAGTTGCAACAACAGCTAACAGCTCTGTCCTGTCGGGAACATGGGGAAATAAGGGAGGAAGTCGCATGA 2202 0.4246 MGRMGRNRTNYSANPADYKLLEEVGYGASATVYRAIYLPLNEVVAVKCLDLDRVNSNLDDIRREAQTMSLIDHPNVVRAYCSFVVERNLWVVMPFMAEGSCLHLMKIAYPEGFEEAAIGSILKETLKALEYLHQQGHIHRDVKAGNILLDSNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKYVKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLVRDDDDDIVEMREEDENKFFTSYKDAIDSQSGMGKNNSDKSPQDEFTSLVESNDMKQSEFLNKKGKILESDLQELGPSKNIIWKRNGSITEATASTSEKDIGISKPKTQSVKSRQTQSGPLVPGTVFGHSLSERGRTLERFENENPPSGEKNNREVRRAPSFSGPLMLPNRASANSLSAPIKCSGGFRDSLDEKSKANLVQIKGRFSVTSENLDLVKDIPLSSVSRRSSQGSPLRKSASVGDWMLDSKQMPTGQYPKDTANNNIPAPLLMPHLQNLFQQTSIQQDLIMNLLNSMQPAEAVDASLNGKLPVPLPRSSENNGSVDSATSDRERLLLVKIAELRASMINLSEELATEKLKQTQLQQQLTALSCREHGEIREEVA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0034 733 MobiDBLite consensus disorder prediction 485 509 - -
Dere09g0034 733 MobiDBLite consensus disorder prediction 445 475 - -
Dere09g0034 733 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 10 707 IPR047173 GO:0043539
Dere09g0034 733 CDD STKc_OSR1_SPAK 17 279 - -
Dere09g0034 733 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Dere09g0034 733 Gene3D Transferase(Phosphotransferase) domain 1 99 329 - -
Dere09g0034 733 MobiDBLite consensus disorder prediction 445 518 - -
Dere09g0034 733 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Dere09g0034 733 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Dere09g0034 733 SUPERFAMILY Protein kinase-like (PK-like) 17 333 IPR011009 -
Dere09g0034 733 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0034 733 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Dere09g0034 733 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0034 733 Coils Coil 689 716 - -
Dere09g0034 733 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0034 Dere-ChrDere09 3288316 3295491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0034 11 725 MAP Kinase Kinase Kinase Kinase AT4G10730 66.248 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dere09g0034 Pkinase 3.4e-61 CL0016