Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1942 ATGGCTCCGTCTTCTCCGATTGTTGCTGATTCGCTTTTTTCACCAATGGCGCCCCAAACCATGGATAACAGCGTTCAGCCATACTATGTTCTTCAGAGAGCTTCATCTCGAAGAAAAGATAGAACATCAGCAGGACAAGGAAAAAAGAGAAAGAGAAAAGAGCTATCTTCATCTCTGCAAGGCACTAACAAACTTGTTGGGAGTATGGCAGAAGAACGTGGTGGCCATGGGCTTCAGCTACTGCAACTTGAAGCTTTTCGCTTTATTTGGTCAAAAATTGAGTCCACTATCAAGGATGTTTTGAGGGATATCAATGCAAGTGTTTTTAATGAAATACAACAATGGGTTCTGGCGTGCTTCAATGCTACTAGATTAACTGGTGAACCTAGCTTCGCTAACTCAACTCATTCTTTTCCTGTTCTGAATAAAAGTACTCCTGGACAACTATTCACTGGGTTGGTTATTACGAAAAACATGGAGTTTGTTGATGACATTTTGACATTTGAAGAGCTTGGCCTTTTCTTGAAATCACATGGTTACCATGTGGTTATGTTGTCATCACTCGATTTTTCGGTAAAAAATGGGATTGCTGGCTGCCTAAAAACTTTGTTGCGAGAGTTATTGGACACTGCTATTGATTCAGCTGATATATCAAACTTAGCATCATGGTATAGAGAACAAGGAAACTGCAATAAACTGCTTGTTCTAATCATTAATGATTTGGAAAGATGCTGTAGGTCGGTCTTATCTGATTTCATCCTCATGTTAAGTGAATGGATAACGAGGGTTCCAATCATCTTAATATTTGGAGTTGCAACCACAGTGGATGCCCCAAGCAGGATTTTTCCATCTCATGTTCTTCAGCATTTGTGCACCTGTAAGTTTATGCTTGGATCACCAGCTGAGAGAATGGATTCCATTGTTGAGGCTGTTCTAGTGAAGCAGTGTGCTATACTTAGTATTGGTGATAAAGTGGCACTATTTCTTAGAAACTACTTCTTAAACAAGGATGGGACTTTAACTTCTTTTATAAGAGCTTTAAAGATAGCATGCATGTTACAATTCTCTGGGGAGCCTCTGAGTCTCATATTTAGGCAAGCACTTGCTGAAGAAGACCAGAAAGATGGAAAATTTGCATTTTCACCTGATACCGTGTTGAAGTATGTGCATGAACTTCCATCTTGTGTGAGGAATCAAATGGTTGATCAGACTGGTAAGGATTTGGCTCAGGGCTTCTCAAATTTGGTCACAGCGAAGAAGCTGTGGAGCACTGCAATCTTGTGCTTATATGAAGCAGGAAAATGTAACAGAATTCGGCTGTTGGACTTGTTTTGTGAAGCAATCAATCCAGAGTCGTTCCTGTCAGCGGCTTCTGATTATCATGTGGTGAATGGAAATCATTGTGGCTTATCCTTATCCAATGATTCTTGCCAGCAATATTCAATAGTTCAAAGGGGTGGTCTTATTTCTCAGATAGTACGCAAAGTGAGGGATCTTCCTTCAGGAATGCTATTTCAGTTGATTAAAAGTTGGGAAAAACTTACGGCAGATGTTTTTGAGATTCGGGACAAATTGAAGACATTGCAATCTTCATTAAGATGTGAAGATGGAAAAAGGCCAAGAAAGAGTTCTGACATTTCCAAGAGATATGCGTCCAGGATTTCATCAAACAGTGAGAAGGACTCAGAGATCTTAAATTCACAAGCTGTTGCATTTATAAATTGCTTAGTCAGGAGTTATATGAGGCCCAACAATTGCATGCCTTTTGATCAAATTTTCTGCTTTAATAAGGTTGAGAAGCTACAATTGGCTTTGACTGGAGATCCAAGAAGAAGAATTCAAGTTGATCTTTTGGAATTCAATAAGATTTTAAGGTGCATTTGCTGTAAAAAGAGTGTCAATGCCCTATTGCCATCTATGCATGATTCCTCAATTATGTATTCCCTCGCTGAGGAGCACGGTGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAAAACAGTTATTCTTCACCACCGGACTAAACACAAGCAAAAGTCAAAGCAATCCCCAGTAAAAAAGAAGAGAAAGGATACAAATGGATCTATAGACCCAAATGAAGCTTCAATTCAAGCACGATTTTGTAAGGCAGTTACAGAGTTGCAGATCACTGGCTTACTTAGAATGCCCAGCAAGAGACGCCCTGATTTTGTACAGAGAGTAGCTTTTGGACTTTGA 2220 0.3959 MAPSSPIVADSLFSPMAPQTMDNSVQPYYVLQRASSRRKDRTSAGQGKKRKRKELSSSLQGTNKLVGSMAEERGGHGLQLLQLEAFRFIWSKIESTIKDVLRDINASVFNEIQQWVLACFNATRLTGEPSFANSTHSFPVLNKSTPGQLFTGLVITKNMEFVDDILTFEELGLFLKSHGYHVVMLSSLDFSVKNGIAGCLKTLLRELLDTAIDSADISNLASWYREQGNCNKLLVLIINDLERCCRSVLSDFILMLSEWITRVPIILIFGVATTVDAPSRIFPSHVLQHLCTCKFMLGSPAERMDSIVEAVLVKQCAILSIGDKVALFLRNYFLNKDGTLTSFIRALKIACMLQFSGEPLSLIFRQALAEEDQKDGKFAFSPDTVLKYVHELPSCVRNQMVDQTGKDLAQGFSNLVTAKKLWSTAILCLYEAGKCNRIRLLDLFCEAINPESFLSAASDYHVVNGNHCGLSLSNDSCQQYSIVQRGGLISQIVRKVRDLPSGMLFQLIKSWEKLTADVFEIRDKLKTLQSSLRCEDGKRPRKSSDISKRYASRISSNSEKDSEILNSQAVAFINCLVRSYMRPNNCMPFDQIFCFNKVEKLQLALTGDPRRRIQVDLLEFNKILRCICCKKSVNALLPSMHDSSIMYSLAEEHGDLINLHDWFQSFKTVILHHRTKHKQKSKQSPVKKKRKDTNGSIDPNEASIQARFCKAVTELQITGLLRMPSKRRPDFVQRVAFGL 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1942 739 MobiDBLite consensus disorder prediction 34 57 - -
Dere08g1942 739 MobiDBLite consensus disorder prediction 1 21 - -
Dere08g1942 739 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 84 362 IPR045667 -
Dere08g1942 739 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 20 738 IPR020795 GO:0003677|GO:0005664|GO:0006260
Dere08g1942 739 MobiDBLite consensus disorder prediction 33 62 - -
Dere08g1942 739 MobiDBLite consensus disorder prediction 674 699 - -
Dere08g1942 739 Pfam Origin recognition complex winged helix C-terminal 610 737 IPR040855 -
Dere08g1942 739 CDD Orc3 81 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1942 20 708 Core DNA Replication Machinery Family AT5G16690 43.804 0.0 556