Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1937 ATGGCAATTATTCTGCGAGCGTTGCTTTTTCTGGGATTCTTGTCGGCTCAGATTCATGTCATTCTCTCTTTCACTGATCCTCAAGATGTTGCTGTACTGAGATCTTTAAAAGATATATGGGAGAACACACCCCCAAGCTGGGACAAATCAGATGATCCCTGTGGAGCACCATGGGAAGGAGTGACCTGCAACAAATCAAGAATTACTTCATTGGGATTGTCTACCATGGGCCTCAAAGGTAAACTAAGTGGAGACATTGGAGGACTCTCTGAATTGAGATCCTTGGACTTATCATTCAACAGAGGCTTAACAGGTCCTCTCACTCCACAATTAGGAGACCTGAAAAAGCTCAATATATTGATCTTGGCTGGTTGCAGCTTCAGTGGCAAAATTCCAGATGAATTGGGAAGTCTCTCAGAGCTATCTTTCCTGGCATTAAATTCAAACAATTTCTCTGGACAAATACCTGCATCATTGGGTAATCTTTCCAAACTATATTGGTTGGACTTAGCAGATAATCAGTTGTCTGGGCCTATTCCTGTTTCAACTTCTACTACCCCAGGCTTAGACATGCTTTTGAAGGCCAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGCTACATTCCACCCAAGCTTTTCAGCTCCAAGATGCTACTCATACATGTGTTATTTGATGGAAATCGTTTAAGCGGGACTATCCCGTCAACAATAGGATTAGTTCAGACACTTGAAGTTCTTCGGCTAGATCGAAACTTCTTGACTGGAGAGGTCCCATCAGATTTCAACAACCTTACAAACATCAATGAATTAAATCTAGCACACAATAATCTGACAGGCCCTTTGCCAGACTTGACTCAGATGGATACCCTCAATTATGTGGATCTCAGCAACAACTCTTTTGATCCATGTGAAGCTCCAACTTGGTTCTCAACTTTGCCATCACTTACCACTCTAATTATGGAGTTTGGATCACTTGAAGGTCCTTTGCCGTCAAAACTCTTCAGCAGTCCCCAAATACAGCAAGTGAAACTAAGGCACAATGCATTGAACAATACTTTGGATATGGGTGACAACATTAGCCCCCAACTTCAGCTTATTGATTTACAAGACAACCAGATTACCTCAGTAACACTCAGTACTGGATACAAAAATACATTGATTCTCATAGGCAATCCTGTGTGCCTCATTGCTCTCTCAAATACAAATTACTGCCAACTACAGCAACAACCCACAAAACCCTATTCTACCAGCTTGGCCAATTGTGGAAGCAAATCTTGTCCTCTTGATCAGAAGCTGAGCCCACAGAGTTGTGAATGTGCTTATCCATATGAAGGAACTCTGTATTTCAGAGGACCTTTGTTCAGAGAATTGTCAAATGTGAATACATTTCATTCTCTTGAAATGAGCCTGTGGGTGAAGCTGGGTCTCACTCCTGGCTCAGTTTCTCTACAGAACCCATTTTTCAACAGTGATGATTATCTTCAGGTGCAATTAGCACTGTTTCCACCATCAGGAACATACTTCAATAGGTCAGATGTGCAAAGAATTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCACCAGAGTTTGGACCCTATTACTTCATTGCATTTCCTTATGCTTTCCCAGACTCTCATGGAGCAGCCTCTCTAAGCAAGCCTCTCATCATTGGGATAACAGTTGGCTGCTCATTTCTGGTTCTGAGCCTCATAGGGTTAGGGACATATGCCATTTTACAAAAGAAGCGAGCAGAGAAAGCTATTGGGTTAAGCAGACCTTTTGCATCTTGGACACCTAGTGGGAAGGATAGTGGAGGGGCACCACAACTGAAGGGAGCAAGATGGTTCTCCTATGATGAACTCAAAAAGTGCACCAATAGTTTCTCCACTAGCAATGAGTTAGGCTTTGGAGGTTACGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGACAAATGGTAGCAATAAAGAGAGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGCTCTCGTCGGCTTTTGCTTTGAACAAGGCGAGCAGATGTTGGTTTATGAATACATGCCCAATGGAACCCTCAGGGACTGTTTGTCTGGGAGATGTGGCATATATCTAGACTGGAAGAGGAGACTGCGTGTTGCTCTTGGGTCAGCAAGAGGACTTGCTTACTTACATGAACTTGCTAACCCTCCCATAATTCATAGAGATGTAAAGTCCAGTAATATCTTGCTGGATGAGAATCTGACAGCAAAAGTTGCAGATTTTGGTTTATCGAAGCTAGTATCAGACAGTGGAAAAGGCCATGTTTCAACTCAAGTTAAAGGCACACTGGGATATCTAGACCCTGAATATTACATGACACAGCAACTGACTGAGAAGAGCGATGTGTACAGTTTTGGGGTGGTTTTGCTTGAACTCATAACTGCGAGGCAACCTATTGAGAAAGGAAAGTACATTGTGCGTGAAGTGCGATCATTGATAAATAAGAAGGAGCAAGAGCATTATGGTTTAAGGGAAGTGTTGGATCCAATGGTTACAAACACTTGTAATCTTGTGGGCTTTAGCACATTCTTGGACCTCACAATGCAATGTGTTGAGGAATCAGCTTCTGACCGTCCAACCATGAGCGAAGTTGTAAAAGCTCTTGAAATGCTTATACAGAATGATGGCATGAACACTAACTCCACTTCTGCTTCTTCTTCTGCCACAGACTTTGCAGTTTCAAAGCCTACTACCACACATCCTTACATTGATACGTTCACCAAAAAGGGCTTCAATGAGAGCAATGCCTTTGATTATAGTGGGGGATACACACTTTCTACAAAAATTGAACCCAAATAG 2895 0.4249 MAIILRALLFLGFLSAQIHVILSFTDPQDVAVLRSLKDIWENTPPSWDKSDDPCGAPWEGVTCNKSRITSLGLSTMGLKGKLSGDIGGLSELRSLDLSFNRGLTGPLTPQLGDLKKLNILILAGCSFSGKIPDELGSLSELSFLALNSNNFSGQIPASLGNLSKLYWLDLADNQLSGPIPVSTSTTPGLDMLLKAKHFHFNKNQLSGYIPPKLFSSKMLLIHVLFDGNRLSGTIPSTIGLVQTLEVLRLDRNFLTGEVPSDFNNLTNINELNLAHNNLTGPLPDLTQMDTLNYVDLSNNSFDPCEAPTWFSTLPSLTTLIMEFGSLEGPLPSKLFSSPQIQQVKLRHNALNNTLDMGDNISPQLQLIDLQDNQITSVTLSTGYKNTLILIGNPVCLIALSNTNYCQLQQQPTKPYSTSLANCGSKSCPLDQKLSPQSCECAYPYEGTLYFRGPLFRELSNVNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPSGTYFNRSDVQRIGFELSNQTYKPPPEFGPYYFIAFPYAFPDSHGAASLSKPLIIGITVGCSFLVLSLIGLGTYAILQKKRAEKAIGLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTNSFSTSNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRVALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLVSDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVLLELITARQPIEKGKYIVREVRSLINKKEQEHYGLREVLDPMVTNTCNLVGFSTFLDLTMQCVEESASDRPTMSEVVKALEMLIQNDGMNTNSTSASSSATDFAVSKPTTTHPYIDTFTKKGFNESNAFDYSGGYTLSTKIEPK 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1937 964 FunFam Leucine-rich repeat protein kinase family protein 598 705 - -
Dere08g1937 964 FunFam Predicted protein 187 408 - -
Dere08g1937 964 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 917 - -
Dere08g1937 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Dere08g1937 964 Gene3D Ribonuclease Inhibitor 189 388 IPR032675 -
Dere08g1937 964 CDD STKc_IRAK 636 901 - -
Dere08g1937 964 Gene3D Transferase(Phosphotransferase) domain 1 706 925 - -
Dere08g1937 964 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1937 964 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Dere08g1937 964 SUPERFAMILY Protein kinase-like (PK-like) 615 923 IPR011009 -
Dere08g1937 964 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Dere08g1937 964 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Dere08g1937 964 SUPERFAMILY L domain-like 288 396 - -
Dere08g1937 964 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Dere08g1937 964 SUPERFAMILY L domain-like 26 301 - -
Dere08g1937 964 ProSiteProfiles Protein kinase domain profile. 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1937 964 FunFam Leucine-rich repeat family protein 28 184 - -
Dere08g1937 964 PANTHER RECEPTOR-LIKE PROTEIN 55 34 902 - -
Dere08g1937 964 Pfam Protein tyrosine and serine/threonine kinase 632 900 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1937 Dere-ChrDere08 28619476 28632954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1937 20 964 Receptor kinase-like Gene Family AT1G79620 72.746 0.0 1449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dere08g1937 PK_Tyr_Ser-Thr 1.6e-48 CL0016