Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1934 ATGGCACCACCAGCTCCTCCTCCTTCCTCCCCTCTGTCCTTCACAGTACGGCGGCGTCAGCCAGAGCTGGTGGCACCGGCGAAGCCCACGCCTCGCGAGGTGAAGCTGCTCTCAGACGTCGACGACCAGGAGGGCCTCCGGTTCCAAATCCCGGTGATTCAGTTCTACCGCTACGACCCTTCCATGGCGGGAAGAGACCCCGTGGAGGTGATCCGAAGAGCACTGGCTCACACTCTGGTGTTCTACTATCCGTTCGCCGGCAGGCTGAGGGAAGGGCCTAATCGGAAGCTCATGGTGGACTGTACCGGAGACGGCGTCGTTTTCATCGAGGCCGACGCTGACGTCACGCTTGCTCAATTCGGCGACGCTCTTCAGCCTCCGTTCCCGTGCTTGGAAGAGCTTCTATATGATGCTCCCGGGACTTCACCGGTTCTTGGCGCGCCGCTTCTTCTTATACAGGTGACGCGCCTCAAATGTGGTGGCTTTATTTTTGCCCTTCGTCTCAACCACACCATGAGCGATGCAGCTGGTTGCGTACTATTCATGAGTGCGTTAGCCGAAATAGCTCGCGGTGCTCGTGACCCTTCAGTGCCACCCGTGTGGCGTAGGGAGCTTCTAAATGCGAGAAACCCACCGCGCGTGACATGCACGCATCGTGAATACGATGAAGTCCCAGACACTAAGGGAACTATCATCCCTTTGGATGACATGGCCCATCGTTCCTTCTTCTTTGGCCCAAACGAAGTTGCCGCCATTCGCAGTAGCATTCCTTATTATCTCCGGCAATGCTCCGATTTTGAACTCATCACGGCGTTCCTATGGCGTTGCCGTACAATGGCATTACAGCCAAGCTTTGACGAAGAAGTTCGCATAATATGCATCGTCAATGCACGCGCCAAATTTAGTCCTCCGTTGCCGACAGGGTATTACGGCAACGCCTTCTCCTTTCCGGTGGCGGTGACCACCGCCGGAAAGTTATGCGATTATCCATTGGGATATGCTTTGGAGTTAGTGAAGAAAGCAAAAAGTGATGTGACTGAGGAGTACATGCACTCGTTGGCAGACCTAATGGTGATTAAGGGACGGCCTCATTTCGCGGTGGTGAGGTCATACCTCGTGTCGGACGTGACACGTGCCGGCTTCGGAGAGGTGGACTTTGGGTGGGGGAAGGCGGCGTATGGCGGTCCGGCAAAGGGAGGAGTTGGAGCCATTCCTGGGGTGGCAAGCTTTTATATACCATTTAAGAATGCTAAAGGAGAAGAAGGCTTAGTGATACCTGTTTGTTTACCAGCTGATGCCATGGAGAGATTTGTTAAGGAGGTAGATAACATGCTTACGAACCATGCTCAAAATTCAAGGTTTATCACTTCTTCCTTATAA 1380 0.5384 MAPPAPPPSSPLSFTVRRRQPELVAPAKPTPREVKLLSDVDDQEGLRFQIPVIQFYRYDPSMAGRDPVEVIRRALAHTLVFYYPFAGRLREGPNRKLMVDCTGDGVVFIEADADVTLAQFGDALQPPFPCLEELLYDAPGTSPVLGAPLLLIQVTRLKCGGFIFALRLNHTMSDAAGCVLFMSALAEIARGARDPSVPPVWRRELLNARNPPRVTCTHREYDEVPDTKGTIIPLDDMAHRSFFFGPNEVAAIRSSIPYYLRQCSDFELITAFLWRCRTMALQPSFDEEVRIICIVNARAKFSPPLPTGYYGNAFSFPVAVTTAGKLCDYPLGYALELVKKAKSDVTEEYMHSLADLMVIKGRPHFAVVRSYLVSDVTRAGFGEVDFGWGKAAYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPADAMERFVKEVDNMLTNHAQNSRFITSSL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1934 459 Pfam Transferase family 16 443 - -
Dere08g1934 459 MobiDBLite consensus disorder prediction 1 30 - -
Dere08g1934 459 Gene3D - 224 440 IPR023213 -
Dere08g1934 459 Gene3D - 15 223 IPR023213 -
Dere08g1934 459 PANTHER ACYL TRANSFERASE 4 14 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1934 Dere-ChrDere08 28579693 28582628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1934 16 439 Monolignol Biosynthesis Gene Families AT5G48930 28.188 6.80e-46 163