Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1931 ATGATGTCTGTTGAAACTCAACAGAACCCGGACCTCCCATCTCCTTCTCCTCCAAAACCTCTCCAAGAAGATCATCAAAATTCTGTAACATCTCCTTCTGTTCCAAAACCTGTTCAAGAAGATGAGAATTCTTCAGCAAAATCTACTTCTCCTCTAAAACCTATACAAGAAGATGAGAATTCTGCGAAATCTCCTTCTACCCAAACTACGCATATCTTCAAGTCAAAATTACCAGACATACCTATCTCCAACCACCTTCCTCTTCATACCTACTGCTTCGAGAAGCTCCCCCAGTTCTCCGACCGGCCCTGCCTCATCGTCGGCTCCACCGGCAGAATCTACACCTACGCGGAAACGTACCTCGTGTCGCGAAAGATCGCCGCCGGCTTCTCTAAGCTTGGAATCAAGAAAGGCGATGTCATCATGATTTTGCTACAGAACTGCGCGGAGTTTGTGTTCTCGTTCGTCGCCGCGTCCATGATCGGCGCCGTCGCCACCACCGCCAACCCGTTCTACACCGCGGCGGAGATCTTCAAGCAGTTCACCGCCGCGAAGGTGAAGCTGATCATCACGCAATCAGCGTACGTGGACAAGCTTCGTGACCACGAGGGCGTGGAAATCGGCGAGGAGAAGCTTAAGGTGATCACCATCGACGACCCGCCGGAGAAGTGCATGCATTTCTCGGTGGTGTCCGAGGCCGACGAGAGCGATGTGCCGGAGGTGGAGATCGACCCAGACGACCCGGTAGCGCTGCCGTTCTCCTCCGGCACGACGGGGCTGCCGAAGGGGGTGATTCTGACGCACAAGAGCTTGACGACGAGCGTGGCGCAGCAGGTGGACGGAGAGAATCCAAACCTGTATTTGAAGCCAGAGGATGTGCTGCTCTGTGTGCTTCCATTGTTCCACATATTCTCTCTGAACAGTGTGCTGTTGTGCGCTCTGAGGGCGGGAAGTGCGGTGCTGCTGATGCACAAGTTCGAGATAGGGGCGTTGCTGGAGCTGACGCAGCGGCACAGGGTGTCGGTGGCGATGGTGGTACCGCCGCTGGTGCTGGCGCTGGCAAAGAATCCGATGGTGGCGGACTTCGATCTGAGCTCCATACGGCTGGTGCTGTCAGGGGCTGCGCCGCTGGGGAAGGAGTTGGAGGAGGCTCTCAGAAGCAGGGTGCCTCACGCCGTTTTGGGACAGGGTTATGGAATGACGGAGGCAGGGCCAGTTCTGTCAATGTGCTTGGGGTTTGCAAAGCATGCCTTCCCAACTAAGTCAGGTTCGTGTGGCACTGTGGTTCGAAACGCAGAGCTCAAAGTGGTTGACCCTGAGACCAGCCTCTCTCTTCCGTACAACCAAGCTGGTGAGATTTGTATCCGAGGCTACCAGATCATGAAAGGATATCTTAATGACGAGAAGGCCACAGCAACAACCATTGACTCAGAGGGTTGGCTTCATACCGGAGATATTGGCTACGTTGATGATGACGAAGAGATTTTCATTGTTGATAGGGTTAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGCCACCGGCGGAACTGGAAGGCCTTCTTGTGAGCCACCCGTCCATTGCTGACGCAGCCGTTGTCCCGCAAAAGGATGACGTGGCCGGTGAAGTTCCAGTTGCTTTTGTGGTCAGGTCAAATGGCTTCGATCTCACCGAGGAGGCTGTCAAGGAATTCGTAGCCAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTACTTTGTTCATGCAATTCCAAAGTCTCCATCTGGGAAGATATTAAGAAAAGATCTGAGAGCAAAGCTAGAGAATGGAAGCACCCAAATGCCTTGA 1830 0.5306 MMSVETQQNPDLPSPSPPKPLQEDHQNSVTSPSVPKPVQEDENSSAKSTSPLKPIQEDENSAKSPSTQTTHIFKSKLPDIPISNHLPLHTYCFEKLPQFSDRPCLIVGSTGRIYTYAETYLVSRKIAAGFSKLGIKKGDVIMILLQNCAEFVFSFVAASMIGAVATTANPFYTAAEIFKQFTAAKVKLIITQSAYVDKLRDHEGVEIGEEKLKVITIDDPPEKCMHFSVVSEADESDVPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKPEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELTQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRSRVPHAVLGQGYGMTEAGPVLSMCLGFAKHAFPTKSGSCGTVVRNAELKVVDPETSLSLPYNQAGEICIRGYQIMKGYLNDEKATATTIDSEGWLHTGDIGYVDDDEEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDDVAGEVPVAFVVRSNGFDLTEEAVKEFVAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENGSTQMP 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1931 609 Gene3D - 502 606 IPR045851 -
Dere08g1931 609 MobiDBLite consensus disorder prediction 1 69 - -
Dere08g1931 609 FunFam Long-chain-fatty-acid--CoA ligase FadD 74 502 - -
Dere08g1931 609 FunFam 4-coumarate--CoA ligase 2 503 604 - -
Dere08g1931 609 MobiDBLite consensus disorder prediction 21 69 - -
Dere08g1931 609 CDD 4CL 82 597 - -
Dere08g1931 609 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
Dere08g1931 609 Gene3D - 63 501 IPR042099 -
Dere08g1931 609 Pfam AMP-binding enzyme C-terminal domain 516 591 IPR025110 -
Dere08g1931 609 SUPERFAMILY Acetyl-CoA synthetase-like 83 604 - -
Dere08g1931 609 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 68 599 - -
Dere08g1931 609 Pfam AMP-binding enzyme 97 507 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1931 Dere-ChrDere08 28517960 28525361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1931 69 514 Monolignol Biosynthesis Gene Families AT1G65060 71.938 0.0 659