Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1930 ATGGAGATTCCTTATCTGAACCACCTCGCCCAGCATTCCTCTTGGGCAAGAGTATACACCACCACGAGGACTCAACTTCCTCCTCCAGCAAAGGTTTTCTTTTGCCAGGCAAAAAATGATGGGTCATTAAAGTCAATGCTTCCAACCCTGTTAGCGGCAGAAAAGGAAGAAGCCAAGGCTGTATTAACCTTGTTTCTGAAGAAACAAGGTTTGAGCAATGCAGTTGCTGCCAGAACCATCAACAAGTCAGACTTTTTTATCGATCACCTTGTCTCAAGGCTTCACTCTAAACATAAATCTCGGTATCTAGTAGGTAGAGAACTTACAACTCTTGAGATTAGAGATGCTCTAATTCCTTATCTTGAATCCCTTTTTGAAGAGTATGGAAACATTTTGATGGATTTTGTGGAAAATTATCCAAACCCTCCTGTCAAAGAGAAACCAAAAGTGCCAATTTCTATCCCTAGTCCGTTGGTGGAATCTAAGAAGATGAAAGCTATGTCTCGAGTAAGTGAGATTGACCCCGCTGGCAAACTTCGCCCCCATATTGTCTATCTATTGGAGCTTGGCATGGACATTGAGCAGATCAAGAGTATCACGCGAAGATTTCCATCCTTTGCCTACTATAGCTTGGAGGGGAAAATTAAGCCAGTGGTTGAGTTTCTTCTAGAACTTGGAGTGTCAAAAGCTGACATTCCAATCATCCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCTGAAAATCTTAAACCCACCATGAAATTCTTAGAGACTTTGGGTGTGGACAAGCAGCAATGGGCAAAGGTGATATACCGATTTCCAGCTCTTCTAACATATAGCAGGCAGAAGGTGAGGTCAAGTATAGATTTCCTCCATGAAATTGGCCTCTCAGAGGCGAGCATAGGTAAGATTTTAACTCGCTTCCCCAGTATCATTAGTTACAGTGTAGAGGACAAGCTACGACCCACAGCTAATTATTTCCGTTCCTTGGGAGTTGATGTTGGCATTCTTTTATTTCGATGTCCACAAAATTTCGGCCTCAGCATTGATGCCAATCTAAAGCCTGTAACAGAATTTTTTTTGGAGAGGGGATACACATTACAGGAAGTTGGGACCATGATTTCAAGATATGGAGCTTTATATACTTTTAGCTTGGCAGATAATTTGATTCCAAAGTGGGAATTCTTTCTGACCATGGATTACCCCAAAGCAGAGCTGGTTAAATTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACCAAGATATGCTCGAATGAAGGAGTCTAGAGTGAGGTTGCTGCTGAACCAGGTTCTGTCTCTATCAAGTAGTGACTTTGACAAGGCCTTGAAAAAGAAAATCCAGAAAATGCAAATTGATCAGGACTCTAGTTGTAGTATTAAAGATGTTCAATCAAAAAAGGGAAAATGA 1443 0.4123 MEIPYLNHLAQHSSWARVYTTTRTQLPPPAKVFFCQAKNDGSLKSMLPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDFFIDHLVSRLHSKHKSRYLVGRELTTLEIRDALIPYLESLFEEYGNILMDFVENYPNPPVKEKPKVPISIPSPLVESKKMKAMSRVSEIDPAGKLRPHIVYLLELGMDIEQIKSITRRFPSFAYYSLEGKIKPVVEFLLELGVSKADIPIILTKRPQLCGISLSENLKPTMKFLETLGVDKQQWAKVIYRFPALLTYSRQKVRSSIDFLHEIGLSEASIGKILTRFPSIISYSVEDKLRPTANYFRSLGVDVGILLFRCPQNFGLSIDANLKPVTEFFLERGYTLQEVGTMISRYGALYTFSLADNLIPKWEFFLTMDYPKAELVKFPQFFGYSLEERIKPRYARMKESRVRLLLNQVLSLSSSDFDKALKKKIQKMQIDQDSSCSIKDVQSKKGK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1930 480 PANTHER CGI-12 PROTEIN-RELATED 155 455 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 269 299 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 FunFam Transcription termination factor MTERF5 chloroplastic 240 460 - -
Dere08g1930 480 Pfam mTERF 290 450 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 Pfam mTERF 47 294 IPR003690 GO:0003690|GO:0006355
Dere08g1930 480 Gene3D Transcription termination factor 3, mitochondrial 237 460 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere08g1930 mTERF 7.4e-21 No_clan