Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1921 ATGAATGTGGCCCAAGTAGAGTTTGAATTCTACATGACAAACACACTCTTCATATCTTTACCCCAACCATCGCTTCCCTCTGCGCTGTCGTGCAACCCAACAAATTCTCTGGACACCAGTGCCAATCTTCAGAATTGGATCGTCAAACAAGTTCGCCCCATGAGATATGTGGCTGCCAGTAGTGTACCAGAGTTAGAATCTAAGAAACAGAAGCTTTTGAGTGGTTGTGTAGCAGTTGATTCAGTAAGGGTCTGTACTATATGCAACATTGCTTGCAATAGTGAAGAAGCTTTTAGCAAACATCTAACTGGAAAAAAGCATGCTGCTCAGAGTAGTGAGGACAAGAAATGGTCTTACAGGAGAATACTAAATCTTGGAGAATTACATATGTGGGTTCGCTTGACATCTAATAATGGGATTGCTCCAAAGAAAATCAAGGTTGCTCAACCTGCACGGTGTGAAATTGGCATGATCGATTGTAATAGTAAGAATGTATATGAGGCTTACTTATCTGGGAAGAAACACCTGAGGAACCTGCTGAAACTATCAAAATCAAAAAATGATGGTGCTGGTGCTAGTGTAGCCTGTGCTACTGCGGTGACCGTACCAGAAAATTCTGTGCAACAGGTAACAAATCCAGGAATTGATCCACAGGAAAAGCCAGACAATGATAAACAAGAAGGGATCAATTCACATAAACCAGGGAATGCAGTCATGTTAGAGTCTCCAGAAAGGAATTTTACTGAGACAAAGAAACGTGAACATAAACTCGATGATGGTGGGGCTGCAACAACTTCAGTTAGATTGTGCAGTATATGCAATGTGGTCTCACCTCGCTGGGCAGAAACATGCTGCTATGGTGAAAAAACATGCAGAGTCAACTACTAG 888 0.42 MNVAQVEFEFYMTNTLFISLPQPSLPSALSCNPTNSLDTSANLQNWIVKQVRPMRYVAASSVPELESKKQKLLSGCVAVDSVRVCTICNIACNSEEAFSKHLTGKKHAAQSSEDKKWSYRRILNLGELHMWVRLTSNNGIAPKKIKVAQPARCEIGMIDCNSKNVYEAYLSGKKHLRNLLKLSKSKNDGAGASVACATAVTVPENSVQQVTNPGIDPQEKPDNDKQEGINSHKPGNAVMLESPERNFTETKKREHKLDDGGAATTSVRLCSICNVVSPRWAETCCYGEKTCRVNY 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1921 295 Gene3D Classic Zinc Finger 141 190 - -
Dere08g1921 295 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Dere08g1921 295 PANTHER ZINC FINGER PROTEIN 385B-LIKE 143 276 - -
Dere08g1921 295 Pfam Zinc-finger of C2H2 type 85 107 - -
Dere08g1921 295 Gene3D Classic Zinc Finger 63 113 - -
Dere08g1921 295 MobiDBLite consensus disorder prediction 245 259 - -
Dere08g1921 295 MobiDBLite consensus disorder prediction 207 259 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere08g1921 Dere-ChrDere08 28284811 28287676 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1921 10 187 C2H2 Transcription Factor Family AT5G61190 24.457 3.36e-07 49.7