Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1913 ATGGCTTTTCTCTTTAACCACCCCCACCATAGAAGCAGCTGCTGCTACCTCTTCGTGATTCTCTTGTACTTCCTTTCTTCTCTTCTTGCCATTAATTCACTTTCCACTGTTTCCATTTCTGGAACTTCCAACCACACATTGATTTGTGCCTTACAGAATTCGAACCAGTCAGAAGGACGAAGAGCACTTCTTAACTGTACCAGTTTTCCCTCAGGCATTCAAATTCAAGTGAACCCCACTTTTTCCTTCTCTGAGATTGTAGGAGGAAATGGGTTTCTGTGTGCATTGAGGACATCAACACCTTCTTCTTCTTCTTCTTCTACTTCTGCCATGTTTTGTTGGAGATTCTCTGCCAATGCAACGAATGTTTCCGCTAAGCGCGTATACCGTGGGCCTGTGATTCAGAATCTTGATGCCGGAGACTCCCACATATGTGGCCTGTCAGCTATGAACAATAGGATCAACTGTTGGCAATGGCCTGGGTTCAACAGAAGCATGGTGAGAAGCTTCTCAAGCATCGCTGCGGGAGAGAATTTCGTTTGTGGGTTAATGGAAACAACTGGGAATGTTAACTGCATAGGAAGTAATACTAATAGCGGTACAGTTGTTGGCCATGAACCCAAAGGGAATTACTTTGTTATTTCTGCTGGAACCAGGCATGCTTGTGCTATCTTCTCTTCTAATGGAAGTTTGGACTGTTGGGGTGATGTGCCAGAAGCCTCACTGATACCTCAAGGAAGTTTCACTTCTTTGGCTTCGGGAGAGAATCGAAGTTGTGCTTTGAGGGCTAAGAATCAAACAGTTGTTTGTTGGGGGACTGATAATTTCACCATGCCTGAGAGCTTGAGAGACAATTATTTTGTAGCAATTGCAGCAAAAGGAAGTGTTTTCTGTGGGGTTAAGTCTGAAGACTTATCTTTGCATTGTTGGGGAAATGGAAATTTGAGGCCAGATAGTAATGATACCAAGGTGTTTGACAAGGTCCTACCAGGCCCTTGTAGGAGTGAATGTTCATGTGGACCATTGTCAGATTATGCACAGTACTGTGATCAAGGATTCATTTGCAGCCCTTGTCAATCTGAACCGTCACTGGAACTGCCACCGTCACCGGCAATGAGTCCTTCTTCCCAACCTGGAAACAGTGAATGGAGCAGCAAAATGGTGGCATTTCTAGTGGTGGGATGTGTGGGTTCACTTTCTTTGTTGCTAGTCTTGGCCTTCTTTCTTTATATGTACTGCAAAGGCCGAGGATGTCGGCGAGTCCATGACTCTGGCCGGTTGGACGAGCAGGGAACTTCACCGAATCCGGCAGAAGCTCCACAAGATCAACCTGCAGCCAAACCAGTTTTGGAGAAGCGACTTAGCCATATAATCAGTATGGGAAATGGTGGCCATTTGGAGGAGTTTTCCCTCCAATTACTACTTGAAGCCACCAACAATTTCTCAGAGGATAAGAAAATAGGGACAGGCAGCTTTGGCTCAGTATATCATGCCACACTTGAAGGTGGCAGAGAAGTTGCCATCAAAAGAGCTGAAATCTCACCCACCTCCCCATCATACAGAATTCTAGGTGGCACCAAGCGCCAAGAAGACAGAGACCATGCCTTTGTGAATGAGCTTGAATCACTATCCAGACTCAACCACAAGAACCTCGTCAGATTACTAGGTTTCTTTGAAGACAACCATGAAAGAATTCTGGTGTACGAGTTCATGCAAAATGGAAGCCTAAATGACCATCTCCACATTCTCCCTTCTTCATCTTCAGATTCTGATTCTCCTCTCAACTCGTGGGCAGGACGCATCAAGGTAGCTTTAGATGCAGCAAGAGGCATAGAATACCTACACGAGTATGCCACACCACCAATCATTCACAGAGACATCAAGTCAGCAAACATACTATTGGATGCTAAATACACAGCCAAAGTGTCAGATTTTGGACTCTCTCTAATGGGTCCTGAAGATGTGGAGTCTCATCTTTCTCTTCTTGCAGCAGGAACTGTAGGGTACATGGACCCGGAGTACTACAGGCTGCAACACTTGACCACAAAGAGTGATGTGTACAGTTTTGGGGTGGTTTTGCTGGAACTGCTAAGTGGATATAAAGCTATACATAGAAATGAGAATGGTATGCCTAGGAATGTGGTGGATTTTGTGGTGCCATACATTGTGCAGGATGAGATTCACAGGGTTTTGGACCATAGGGTGCCACCTCCAACACCTTATGAGATAGAGGCTGTAGCATTTGTGGGATATTTGGCCGCAGATTGTGTTAGTGTAGAAGGAAGATATAGGCCTACCATGACTCAAGTTGTAAATAGCTTGGAAAGAGCATTGGCTGCTTGTTTAGCCCAACCTTCGCTGTCTTGGTCCACAGCTGCTTCTTTAGAGTAA 2391 0.4517 MAFLFNHPHHRSSCCYLFVILLYFLSSLLAINSLSTVSISGTSNHTLICALQNSNQSEGRRALLNCTSFPSGIQIQVNPTFSFSEIVGGNGFLCALRTSTPSSSSSSTSAMFCWRFSANATNVSAKRVYRGPVIQNLDAGDSHICGLSAMNNRINCWQWPGFNRSMVRSFSSIAAGENFVCGLMETTGNVNCIGSNTNSGTVVGHEPKGNYFVISAGTRHACAIFSSNGSLDCWGDVPEASLIPQGSFTSLASGENRSCALRAKNQTVVCWGTDNFTMPESLRDNYFVAIAAKGSVFCGVKSEDLSLHCWGNGNLRPDSNDTKVFDKVLPGPCRSECSCGPLSDYAQYCDQGFICSPCQSEPSLELPPSPAMSPSSQPGNSEWSSKMVAFLVVGCVGSLSLLLVLAFFLYMYCKGRGCRRVHDSGRLDEQGTSPNPAEAPQDQPAAKPVLEKRLSHIISMGNGGHLEEFSLQLLLEATNNFSEDKKIGTGSFGSVYHATLEGGREVAIKRAEISPTSPSYRILGGTKRQEDRDHAFVNELESLSRLNHKNLVRLLGFFEDNHERILVYEFMQNGSLNDHLHILPSSSSDSDSPLNSWAGRIKVALDAARGIEYLHEYATPPIIHRDIKSANILLDAKYTAKVSDFGLSLMGPEDVESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLSGYKAIHRNENGMPRNVVDFVVPYIVQDEIHRVLDHRVPPPTPYEIEAVAFVGYLAADCVSVEGRYRPTMTQVVNSLERALAACLAQPSLSWSTAASLE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1913 796 Gene3D Phosphorylase Kinase; domain 1 446 570 - -
Dere08g1913 796 FunFam PTI1-like tyrosine-protein kinase 3 571 785 - -
Dere08g1913 796 SMART serkin_6 481 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1913 796 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Dere08g1913 796 Pfam Protein kinase domain 481 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1913 796 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 208 784 IPR044815 GO:0004674
Dere08g1913 796 SUPERFAMILY Protein kinase-like (PK-like) 458 774 IPR011009 -
Dere08g1913 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Dere08g1913 796 SUPERFAMILY RCC1/BLIP-II 111 340 IPR009091 -
Dere08g1913 796 Gene3D - 76 340 IPR009091 -
Dere08g1913 796 CDD STKc_IRAK 487 776 - -
Dere08g1913 796 Gene3D Transferase(Phosphotransferase) domain 1 571 784 - -
Dere08g1913 796 ProSiteProfiles Protein kinase domain profile. 481 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1913 796 MobiDBLite consensus disorder prediction 425 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1913 Dere-ChrDere08 28081185 28083575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1913 33 785 Receptor kinase-like Gene Family AT5G47850 50.783 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere08g1913 Pkinase 5.5e-43 CL0016