Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1909 ATGGCTGGGCAATCTGATCCTCACCTTTCGCTGTTTTCAGCTGAAGAGCTTGAATTTATAGCAGAGGATGAGATGGTTGAGATCGTACCAAATCTTAAAATGGATGCTCTCAATCTAATAAGTGGAGATTTTGGCCCATTTGCCCCACAAATAGCTACTCAAGTTCCGTTATGGTTGGCTGTGGCTTTGAAGAGGAGGGGCAAATGCTCTATTCGTGCTCCTGAATGGATGTCAGTTGATAAGTTAACTCAAGTTCTGGAGGCTGAGCGAGAATCTCAGGAGATGTCTGAGAAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTTTTTGATCATGCACGTGATGACATTCCTGATGTATATATGGTGAGGTCTCTAGTTGAGGACATCCGAGATGTAAGATTTCATAAAGTAGAGACCGACTTAGAGGCATTTAATGGTCGTACAATTGCTGTTAAGATTAAAAATTTGTCTGCAATGGAGGTGAATATTGTTCGCCCATTTATTAGAAGAGCTTTGCAGGCATTTTGTAAGCATGATAATCCAGAGTTGATACCAGACCCAGAGAGAGTGTCTGAAAGACGTCCACAAGTAGCCAACAATGCTCCAAGAGCGTACTCCACAGTGACCTTTGTTGCTGTGTTAACTGTAAAATGTTGCAAGTGGGCTCATGCTTATGCGCACAGTAAGAAGAAGACGAGGAAGAAGAAGAAGAAGAAGATGAAGATGGGGTTAACATCGCTTAGCATCCACTCTCCATTATATATTACAAGGCCTCTACGCTATCACTACTCCTTCCTTTCAACCTTCTCATCTCCTCTCTTCATCCCCTTTTCGGTAGGAAGTGTTTATAATGGCACAGTTTTAATTCTAGAGAAGTATCAGGGTCATGAAACTTATGGCTATGAATTAAATGAAATTGTGTGTTTTCAGAAAACGTGCAATTTGAATCTTCAAAAATCAGCTGGAGACTCTGCGGACCGAAAAATGGCATGTAGCTTGCTGAAGGTAGAAGAAGATTTAAATGATGAAGTGTGTGAATTAGTCAGCGGAGTGGACCTATCGCTTGGGGAGCGTGAAGATAGCATCCATGCTTATCTCTTCAAGGCAGTCAAAAATAATAATGGAACTGGCATATTGCTTCTGTCAGACATTTTTGGGTTTGAGGATTCTTTCACGAGAGATTTTGCATATCGTGTTGCTTGCAATGGTTACAACATTCTAGTTCCAGACTTATTTCGTGGAAACCCATGGTCAAGGGATCAGCCAAAGACTATGCTTGAACAATGGATTGCTAGACAAGACCCCGAGAGGATTGCTAAAGACATTTCAAGGTGGACAAAATGGATGGTTGATGAATTCATGGCTGCTGGAATTTCCAAAAAGCTTGGCTTGATCGGTTTCTGCTTCGGAGGTGGCCGAGTGTTGGAGGTGCTAGCACAAGACAAGGGTTCTTGTTTTGGAACAGGAGTCTCATTTTATGGTACAAGGATGAAATCACTGGAAGTTTCTGATATACAAGTTCCTGTTTTGTTTATTTTAGGGGACAATGACCCACTTTGTGCTGTGAGTGATGCCCAGAATATTGAGAAGAAAATTGATAAGGGCTCTAAAGTAGTAATTTTCCAAGGTAGAGGTCATGCATTTGCCCATCGGCCTGGATCTCCTGAAGAGGATGCTGATGCAGAGCAAGCCTTCATGATTATGAGAGACTGGTTATATAATAATTTGGTTGTATGA 1743 0.4142 MAGQSDPHLSLFSAEELEFIAEDEMVEIVPNLKMDALNLISGDFGPFAPQIATQVPLWLAVALKRRGKCSIRAPEWMSVDKLTQVLEAERESQEMSEKLPFHYVEISRLLFDHARDDIPDVYMVRSLVEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRALQAFCKHDNPELIPDPERVSERRPQVANNAPRAYSTVTFVAVLTVKCCKWAHAYAHSKKKTRKKKKKKMKMGLTSLSIHSPLYITRPLRYHYSFLSTFSSPLFIPFSVGSVYNGTVLILEKYQGHETYGYELNEIVCFQKTCNLNLQKSAGDSADRKMACSLLKVEEDLNDEVCELVSGVDLSLGEREDSIHAYLFKAVKNNNGTGILLLSDIFGFEDSFTRDFAYRVACNGYNILVPDLFRGNPWSRDQPKTMLEQWIARQDPERIAKDISRWTKWMVDEFMAAGISKKLGLIGFCFGGGRVLEVLAQDKGSCFGTGVSFYGTRMKSLEVSDIQVPVLFILGDNDPLCAVSDAQNIEKKIDKGSKVVIFQGRGHAFAHRPGSPEEDADAEQAFMIMRDWLYNNLVV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1909 580 Pfam GINS complex protein 53 162 IPR021151 -
Dere08g1909 580 CDD GINS_B_Psf2 13 74 - -
Dere08g1909 580 SUPERFAMILY alpha/beta-Hydrolases 363 576 IPR029058 -
Dere08g1909 580 SUPERFAMILY GINS helical bundle-like 74 182 IPR036224 -
Dere08g1909 580 SUPERFAMILY PriA/YqbF domain 12 71 - -
Dere08g1909 580 PANTHER CARBOXYMETHYLENEBUTENOLIDASE HOMOLOG 306 579 IPR042946 -
Dere08g1909 580 Gene3D - 78 185 - -
Dere08g1909 580 Gene3D - 12 77 - -
Dere08g1909 580 Gene3D alpha/beta hydrolase 358 576 IPR029058 -
Dere08g1909 580 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Dere08g1909 580 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Dere08g1909 580 Pfam Dienelactone hydrolase family 364 575 IPR002925 GO:0016787
Dere08g1909 580 CDD GINS_A_psf2 66 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1909 1 147 Core DNA Replication Machinery Family AT3G12530 75.510 4.30e-77 239