Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1895 ATGGCCGTTGACTTGTCGACGATCACCATCCGGCCATTCAAGCTGAACGACGTTGATAATTTCATGGCATGGGCTGGAGATGACAGAGTGACTCAAAATACTCTGATGAACACCATTGCTAGCAGAGAAGAAGCTTTGGTTTTTATCAAAGATGAGTGCATAGCTCACCCTTGGAGACGTTCTATATGCGTAAACGACACTTGCATCGGCGCCGTTTCGGTGTCTCCTTCCTCAGGTGATGACAGATGCAGAGCAGAATTAGGGTATTCCATTGCTGCTATGTACTGGGGCAAAGGGATAGCCACTCAAGCAGTGAAGATGGCTATGTCTCAAGTCTTCAAGGAGTTTCCTGATGTGGTGAGACTGCAGGCTCATGTTGCTGTTGAGAACAAGGCTTCCCAAAGGGTTTTGGAGAAAGCTGGGTTCGTTAGGGAGGGACTACTTCGAAAGTATAAGATTGTTAAGGGTCGTATTAGGGATGTGTATGTTTTTAGTTTTTTGTCAACAGATAATCATCCAAATTCACATTAG 531 0.452 MAVDLSTITIRPFKLNDVDNFMAWAGDDRVTQNTLMNTIASREEALVFIKDECIAHPWRRSICVNDTCIGAVSVSPSSGDDRCRAELGYSIAAMYWGKGIATQAVKMAMSQVFKEFPDVVRLQAHVAVENKASQRVLEKAGFVREGLLRKYKIVKGRIRDVYVFSFLSTDNHPNSH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1895 176 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 168 IPR000182 GO:0016747
Dere08g1895 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 167 IPR016181 -
Dere08g1895 176 Pfam Acetyltransferase (GNAT) domain 8 142 IPR000182 GO:0016747
Dere08g1895 176 Gene3D - 4 174 - -
Dere08g1895 176 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1895 Dere-ChrDere08 27609075 27609605 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere08g1895 Acetyltransf_3 1.3e-24 CL0257