Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1874 ATGGCTCTCGTTCTTCATGCGGGGAACAAAAACAAAAATGCGTACAAAGCACTCATTGCTGCAGAGTACTCTGGTGTTAAAATTGAGTTGGTGAAGAACTTTGAGATGGGTGTATCCAATAAAACTCCTGAGTTTCTAAAGATGAACCCTATTGGAAAGGTTCCGGTGCTAGAAACACCTGATGGCCCTATATCTGAAAGCAATGCCATTGCACGATATGTTACTTGTACAAAGGCTGATAATCCTCTTTATGGCTCAACCTTGATCGAATATGCCCATATTGAGCAATGGATTGATTTTGCAACACTGGAGATAGATGCCAACATCTTGCGATGGTTTGTACCTCGTTCTGGATTTTCTGTGTACCTTCCTCCGGCGGAGGAAGCTGCAATTTCTTCACTAAAGAGGGCACTAGATGCTTTAAACACACATCTTGCTTCCAACACATACCTTGTCGGACATCATGTTACCCTGGCTGATATTATTCTAACATGTAACTTGATATTTGGATTCAACCGAGTAATGACCAAGAACTTCACTTCTGAGTTCCCACATGTTGAGAGGTACTTCTGGACCATGGTCAATCAGCCAAATTTCCAAAAGATAGTTGGCGAGGTGAAGCAAGCAGAATCTGTCCCACCTGTTCAGTCTGCCAAAAAGCCTTCACAGCCTAAAGAGCCTGCCAAACCAAAGGCCAAGGAGGAAGCCAAGGCTGACAAAGAAGTAAAAAAAGAAGCAGTAAAGCCCAAAGCAGAGGCTGGTGAGGAAGAAGAGGCACCGAAGCCCAAGCCAATGAATCCTCTTGACTTGCTGCCTTCAAGCAAAATGATTTTGGATGAATGGAAAAGGCTGTACTCAAACACAAAGTCAAACTTCCGTGAAGTTGCAATCAAAGGGTTTTGGGATATGTACGATCCCGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACCGTCTCATTTGTGACCTTGAACAAGGTGAGCGGCTTTCTCCAACGAATGGATTTGGTTCGCAAGTATGCTTTTGGGAAGATGTTGATTATCGGCTCAGAGCCACCCTTCAAAGTGAAGGGGTTATGGCTTTTCCGGGGAAAAGAGATCCCACAATTCGTAATGGATGAGTGCTATGACATGGAGTTGTATGAGTGGACAAAAGTTGATATCACCGATGAAGCCCAAAAGGAGCGTGTCAATCAGATGATTGAAGACCATGAACCTTTTGAAGGTGAGGCTTTACTGGATGCCAAGTGCTTCAAGTGA 1275 0.4384 MALVLHAGNKNKNAYKALIAAEYSGVKIELVKNFEMGVSNKTPEFLKMNPIGKVPVLETPDGPISESNAIARYVTCTKADNPLYGSTLIEYAHIEQWIDFATLEIDANILRWFVPRSGFSVYLPPAEEAAISSLKRALDALNTHLASNTYLVGHHVTLADIILTCNLIFGFNRVMTKNFTSEFPHVERYFWTMVNQPNFQKIVGEVKQAESVPPVQSAKKPSQPKEPAKPKAKEEAKADKEVKKEAVKPKAEAGEEEEAPKPKPMNPLDLLPSSKMILDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLVRKYAFGKMLIIGSEPPFKVKGLWLFRGKEIPQFVMDECYDMELYEWTKVDITDEAQKERVNQMIEDHEPFEGEALLDAKCFK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1874 424 Gene3D - 80 217 - -
Dere08g1874 424 SFLD Glutathione Transferase (cytosolic) 4 193 IPR040079 -
Dere08g1874 424 MobiDBLite consensus disorder prediction 210 268 - -
Dere08g1874 424 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 264 424 IPR001662 GO:0003746|GO:0006414
Dere08g1874 424 Pfam Glutathione S-transferase, N-terminal domain 9 74 IPR004045 -
Dere08g1874 424 SUPERFAMILY eEF1-gamma domain 266 424 IPR036433 GO:0003746|GO:0006414
Dere08g1874 424 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Dere08g1874 424 CDD GST_C_EF1Bgamma_like 90 210 - -
Dere08g1874 424 SFLD Main (cytGST) 4 193 - -
Dere08g1874 424 FunFam Elongation factor 1-gamma 1 264 424 - -
Dere08g1874 424 Pfam Elongation factor 1 gamma, conserved domain 263 371 IPR001662 GO:0003746|GO:0006414
Dere08g1874 424 CDD GST_N_EF1Bgamma 3 75 - -
Dere08g1874 424 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 424 IPR036433 GO:0003746|GO:0006414
Dere08g1874 424 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Dere08g1874 424 FunFam Elongation factor 1 gamma 80 216 - -
Dere08g1874 424 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Dere08g1874 424 SUPERFAMILY GST C-terminal domain-like 80 214 IPR036282 -
Dere08g1874 424 MobiDBLite consensus disorder prediction 224 263 - -
Dere08g1874 424 FunFam Elongation factor 1B gamma 1 74 - -
Dere08g1874 424 Pfam Glutathione S-transferase, C-terminal domain 132 197 IPR004046 -
Dere08g1874 424 SMART EF1G_2 263 371 IPR001662 GO:0003746|GO:0006414
Dere08g1874 424 Gene3D Glutaredoxin 1 74 - -
Dere08g1874 424 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 424 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1874 Dere-ChrDere08 27172637 27177397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1874 1 424 Eukaryotic Initiation Factors Gene Family AT1G57720 75.236 0.0 631