Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1864 ATGGCATCCACCAAGGAATGTGAAAGCTTCATCTATGTTGCCAAGCTTGTTGAGCAAGCTGAGCACTACGAAGAAATGGTGGATGCGATGAAGAAGGTTGCTAAGCTCAATATTGAATTGATGGTTAAAGAGCAAAACCTTCTCTTTGTTGGGTACAAGAATGTAATGGGTGCAAGGAGAACTTTGTGTAGCATTCTATCCTCGATTAAGCAGAAGGAGGAAGCAAAAAGGAATGATTTAAATGTGAAGCGCATAAAGGAGTATAGGCAGAAGGTGGAATCAAAGTTGTCAAATATTTGCAATGATATCATGTGTGTTATGGACAAGCATCTTATTCCTTCATGCTCGGGTGGTGAATCTAGTGTGTTTTTCTACAAAATGAAAGAGGCTGAGTTACCTCCCACACATCCCATCAAACTGGGTTTGGCTTTGAATTTCTCCATCTTTTATTATGAAATTTTGAACTCTCCTGAAAGAGCCTGTCACCTTGCCAAGCAAGCCTTTGATGAAGCAATCTCAGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAACACACTGATTATGCAGCTTCTTAGGGATAACATTACCTTATGGACTTCTAACATCCCTGAAGATGGAGGGTTGGTCTCTATTCCTGTGCCTGTGATCATTGATAGTAACAAGCTTTGA 675 0.4059 MASTKECESFIYVAKLVEQAEHYEEMVDAMKKVAKLNIELMVKEQNLLFVGYKNVMGARRTLCSILSSIKQKEEAKRNDLNVKRIKEYRQKVESKLSNICNDIMCVMDKHLIPSCSGGESSVFFYKMKEAELPPTHPIKLGLALNFSIFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDNTLIMQLLRDNITLWTSNIPEDGGLVSIPVPVIIDSNKL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1864 224 PIRSF 14-3-3 1 130 IPR000308 -
Dere08g1864 224 PIRSF 14-3-3 128 210 IPR000308 -
Dere08g1864 224 Gene3D - 130 209 IPR036815 -
Dere08g1864 224 Gene3D - 1 129 IPR036815 -
Dere08g1864 224 Pfam 14-3-3 protein 14 128 IPR023410 -
Dere08g1864 224 Pfam 14-3-3 protein 129 201 IPR023410 -
Dere08g1864 224 Coils Coil 13 33 - -
Dere08g1864 224 SMART 1433_4 8 214 IPR023410 -
Dere08g1864 224 SUPERFAMILY 14-3-3 protein 6 202 IPR036815 -
Dere08g1864 224 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Dere08g1864 224 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Dere08g1864 224 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Dere08g1864 224 PANTHER 14-3-3 PROTEIN 8 128 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1864 Dere-ChrDere08 26794161 26795181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1864 1 209 14-3-3 family AT2G42590 64.198 1.22e-109 314