Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1823 ATGTCTCTGAACATGAAAACCCTAACGCAAGCCTTGGCTAAGACCGCTGCGGTCATTGAGAAGAAGGTCCAGACCACCGTGCAGGAGGTGACCGGACCGAAGGCTCTCCAAGACTACGACCTCCTTGACCAGATCGCCTCAGCCGGACCCGGTCTGGCATGGAGGCTCTATTCCGCCAGGCCCAGGGAGCCCTCTCGCCAGCACCAGTATCCGCTTGTTTGTGTTTGGGTACTGGACAAGCGGGCACTGTCCGAGGCGCGAATGCGTGCTGGGTTGACCAAGGCAGCTGAGGATTCGTTTTTGGATTTGATTCGGGCCGATGCGGGTAAATTGGTGCGGCTGAGGCACCCCGGGGTGGTGCATGTGGTGCAGGCGTTGGATGAGAGCAAGAATGCGATGGCAATGGTGACTGAACCCTTGTTTGCGTCGGTGGCTAATACTCTCGGGAATTTGGAGAATGTTGCTAATGTTCCCAAGGAGCTCAGGGGAATGGATATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATAGCAGAATCTCTGGACTTTCTCCATAACCATGCACATCTTGTTCATCGAGCTATATCACCTGAGAATATTCTCATCACCTCAAGTGGAGCTTGGAAACTTGGTGGATTTGGTTTTGCAATTTCAGCAGCTCAGGCCTATGGTGACTCGGCTAATCTGCAAGCTTTCCATTATGCTGAATATGATGTTGAGGACTCTGTTCTGCCACTTCAGCCATCACTGAATTACACAGCTCCTGAGCTGGTGAAGAGCACTGTGTCTTCAGCTGGGTGGTGTTCTGATATTTTCAGTTTTGGTTGTGTTGCTTACCATTTGATTGCTCGCAAGCCCTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGACACATTCTCGTCTATTCCGTCGGAGTTGGTTCCTGACTTGCAGAGGATGCTATCTCCAAATGAGTCTTCTAGGCCAACAGCTATGGATTTTACAGGCTCCCCATTTTTTCGGAATGACACTAGGTTGCGTGCTCTGCGCTTCCTCGACCATATGCTTGAAAGAGATAACATGCAGAAGTCTGAATTCTTAAAAGCTTTATCAGATATGTGGAAAGATTTTGACACCCGCGTATTGCGGTACAAGGTGCTTCCTCCACTTTGTGCCGAACTTAGGAATGTGGTAATGCAGCCAATGATTCTGCCTATGGTTCTCACCATTGCAGAATCTCAGGATAAAAGAGATTTTGAGCTATCAACGCTTCCAGCCCTTGTTCCTGTCTTTAGTACTGCAGCAGGTGAGACTCTACTGCTACTTGTGAAGCATGCAGAGCATATAATCAACAAGACTAGTCAAGAGCATATTGAATCACATGTTCTTCCTATGATTGTCCGGGCCTTTGATGATAGTGATGCTCGTTTACAAGAAGAGGTTCTGAAGAAATCTATATCCCTTTCTAAGCAACTTGATACCGAGCTCGTCAAACAAGTGGTTTTGCCCCGTGTTCATGGCTTAGCACTTAAAACAACAATTGCTGCGGTTAGAGTCAATGCTTTGCTGTGCTTAGGAGACATGGTTAGCCGCCTGGATAAACCTGCTGTCCTGGACATCTTGCAAACTATTCAGCGTTGTACTGCCGTGGACCGTTCTCCTCCTACCCTTATGTGTACACTTGGGGTTGCAAACTCTATTTTTAAGCGGTATGGAGTTGAATTTGTTGCCGAGCATGTTCTTCCATTGATTATGCCCCTCCTGACTGCTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCAGGATGATAGAGGAGAAACGAGGAGTGGTTGTGGCAGATTCTGGAATTCCAGAGGCCACCAAACCATCTCCTTCAATGAATGGTCTTCAAACTGAAGCCTCCAATAAAACTAGCGGCACTGTCGCTTCAACAAAAAGTAGCTCCTCTTGGGATGAAGATTGGGGTAGCACTTCAAAGGGAACTATGACTTCTTCCCAGAGTTCTATTGATAAATCTAGTCAACCTGTGCCAGGAAACCCAGTAATCCAAATGGCATCTTCGCAACAACATCCATCCGCTTCTGCTTTACATAATCAGCAGACAACCATATCATGCCCCTCAGTGGATTTAGAGTGGCCTCCTCGTGCATCTCCCGCTGGTACCCCACAATTAGGTGATACTGAAAGTCATCAGAAGACACCAGGAACCTCGTCTATGTCTAGTTTTGAAGATATTGATCCCTTTGCTAATTGGCCTCCTCGTCCTAGTAGCTCCCTAGGTGGATCTAGAATCTCCAACAATGGTACTTTAGGAACGTCACTGAACAAAAATGGGTCTAGTTTAATGGCGAACACTTCAAATGTTATGAATCATCAAGCCAACAACACTTGGTCTTTTAATTCCCTGAGTTCTGTAGATTCAGTTGGTTTGAACCTTGGAAACCCTAGTTCAACCACCAGTAGTAGTCTGCGTGGTGGTCTATATTCTCAGAATTCTATTGCGTCCCAAAAAGCGAATCAGGGATATCCAGCTATTAATATTTCACACACGGACAATAAGTCAACAGATCTTGGATCCATCTTTGCTTCTGAGAGGAATGATCTGATTGCACCTAAACTTGCCCCACCACCTGCAACGGCAGTGGGTAGAGGTAGAGGAAGAGGGAGGGGGGCTGTTTCAACCACCAAGTCCACTCAAACCAAGTCACGTTCTGAGCAACCACCCCTTATGGATTTGTTGGGGTAG 2784 0.4684 MSLNMKTLTQALAKTAAVIEKKVQTTVQEVTGPKALQDYDLLDQIASAGPGLAWRLYSARPREPSRQHQYPLVCVWVLDKRALSEARMRAGLTKAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNLENVANVPKELRGMDMGLLEVKHGLLQIAESLDFLHNHAHLVHRAISPENILITSSGAWKLGGFGFAISAAQAYGDSANLQAFHYAEYDVEDSVLPLQPSLNYTAPELVKSTVSSAGWCSDIFSFGCVAYHLIARKPLFDCHNNVKMYMNTLTYLSSDTFSSIPSELVPDLQRMLSPNESSRPTAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDTRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKRDFELSTLPALVPVFSTAAGETLLLLVKHAEHIINKTSQEHIESHVLPMIVRAFDDSDARLQEEVLKKSISLSKQLDTELVKQVVLPRVHGLALKTTIAAVRVNALLCLGDMVSRLDKPAVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKRYGVEFVAEHVLPLIMPLLTAQQLNVQQFAKYMLFVKDMLRMIEEKRGVVVADSGIPEATKPSPSMNGLQTEASNKTSGTVASTKSSSSWDEDWGSTSKGTMTSSQSSIDKSSQPVPGNPVIQMASSQQHPSASALHNQQTTISCPSVDLEWPPRASPAGTPQLGDTESHQKTPGTSSMSSFEDIDPFANWPPRPSSSLGGSRISNNGTLGTSLNKNGSSLMANTSNVMNHQANNTWSFNSLSSVDSVGLNLGNPSSTTSSSLRGGLYSQNSIASQKANQGYPAINISHTDNKSTDLGSIFASERNDLIAPKLAPPPATAVGRGRGRGRGAVSTTKSTQTKSRSEQPPLMDLLG 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1823 927 MobiDBLite consensus disorder prediction 883 927 - -
Dere08g1823 927 MobiDBLite consensus disorder prediction 904 919 - -
Dere08g1823 927 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 38 912 - -
Dere08g1823 927 SUPERFAMILY ARM repeat 346 604 IPR016024 -
Dere08g1823 927 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1823 927 MobiDBLite consensus disorder prediction 628 795 - -
Dere08g1823 927 MobiDBLite consensus disorder prediction 735 757 - -
Dere08g1823 927 Gene3D Transferase(Phosphotransferase) domain 1 104 348 - -
Dere08g1823 927 CDD PK_SCY1_like 45 346 - -
Dere08g1823 927 Gene3D - 349 620 IPR011989 -
Dere08g1823 927 MobiDBLite consensus disorder prediction 633 720 - -
Dere08g1823 927 MobiDBLite consensus disorder prediction 768 795 - -
Dere08g1823 927 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1823 927 SUPERFAMILY Protein kinase-like (PK-like) 37 348 IPR011009 -
Dere08g1823 927 Pfam Protein kinase domain 110 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1823 Dere-ChrDere08 25847288 25873601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1823 104 349 CBL-interacting serine-threonine protein kinases AT2G26980 23.413 7.87e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Dere08g1823 Pkinase 6e-24 CL0016