Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1820 ATGAAAGCAAAGGGTAAGAGAATAGAAAATGCAGAAGAGAAAGAAGAAGACAAAATGCACAAATTTGTCATTTTCTTGCTTAAAGACAACGTTGTTTCAGTGCTCCTCTCAGCTCTCATCCAATCCCTGTTCAATCTCTCCTCCCATCGATTCAATGCTCACTCACCATCGTTCCATGCTCTGTCAACATTGTCATTCTATGCTCTACCAATGTCATTGAGAGAAATAGCAATAAATCCAGTGAGATTCGGTGAAGGAGAAGGACCGTCGATTTCGAAATACCCACCGTTAGTCACTGAGCCAGTGAGGCTAAGACGGCGTCGAATCCCCGCCACCGCCACCACCACCACCGCCACCGCCGTCGTGGAGTCTTTCGACGCCGGTGTCGAAAGCGTTGTCGAAGGACAGTTTGCTCAGCGGAGACCTCCAATTTTCATTTTCAAAGGCAAAGCAGCCTCCATTGGAACCTCTTCTCTTCTGGTCCACATCACAGACCAAATAGATGATGAAAGTAGGGGAATGGAAACCTCTGAGAATGCAGGGTTTAGTATGTTTGAAGTTCAGACAAGTGAAGAACCATACAATGATGAGAGATGTCGAGTGTTAGAGAGTTCTTCTCGGGGAAGATTGGGGATTTGTGAAGACCATGCTATTCAAGAACCATACGAGGGTATGGAATTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCTCGACATCTAGGGTTTGTCATGCGTGTTATGTCTTGTAGACGCTCTGAAAGGGATGGAAGGATTCTTGCCAGGAGGCTTGGATGCAATAAGGAAGGTCATTGTATCAGCATTCGAGGGAAATTTGGACCAGTTCGAAAGCCTAGGCCCAGCACAAGAGAAGGTTGTAAGGCGATGATTCATGTCAAATATAACAAGTCTGGGAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCACCCATTGGTAGTTTCTCCACGTGAAGCTCGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTCCGGAATAAAAAGCGGCTGTGTGCTACATATCAAGAACAGCTAACTACTTTTATGAAAATTGTTGAAGAGCACAATGACAAGCTGTCTCAGAAAATTCATCATGTGGTTAATAATTTAAAAGAATTTGAGTCGATAGAGCAGGAGCTCTCGCACAAGAGGTAG 1206 0.4378 MKAKGKRIENAEEKEEDKMHKFVIFLLKDNVVSVLLSALIQSLFNLSSHRFNAHSPSFHALSTLSFYALPMSLREIAINPVRFGEGEGPSISKYPPLVTEPVRLRRRRIPATATTTTATAVVESFDAGVESVVEGQFAQRRPPIFIFKGKAASIGTSSLLVHITDQIDDESRGMETSENAGFSMFEVQTSEEPYNDERCRVLESSSRGRLGICEDHAIQEPYEGMEFESEDAAKIFYDEYARHLGFVMRVMSCRRSERDGRILARRLGCNKEGHCISIRGKFGPVRKPRPSTREGCKAMIHVKYNKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRNKKRLCATYQEQLTTFMKIVEEHNDKLSQKIHHVVNNLKEFESIEQELSHKR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1820 401 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 168 394 - -
Dere08g1820 401 Pfam FAR1 DNA-binding domain 236 324 IPR004330 -
Dere08g1820 401 Coils Coil 334 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1820 Dere-ChrDere08 25771261 25788872 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere08g1820 FAR1 1.7e-27 CL0274