Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1817 ATGGTAGTAACTTTCCTCGGTTTGATCCCAAGTGATTGTGTATGTATGCTCCCTCAATTGAAAATTCAAATTCATTTAGCAAACTCCATTTTTGTAGATTTTGAGGGTTGGTTTTATGTTGCAGTAACTTTTACATCCCAAGGTATATACGAGTTCTGTTTACACCCAGTTGAATATCTCCTACAGTTAGGTCCAAATCAAGTTCAAGAGAGTGGCTTATTGAGGTTTTCTTTTTTAATCAACATGGAAGACCAACTGGATGGTGGAAATAGGGACGTGGAAACTTCTGGGGATGCTGGCACGAGTTCATTTGAGGTTCACATAAATCAAGAACCATATGAAGGAATGTCATTTGAATCAGAAAAAGCTGCAAGAGATTTCTACGATAACTATGCCTCACGAGCAGGATTCATGACTCGTGTTCTGTCATCACGGAAGTCTGAACGGGATGGTTCAATTATTTCTCGTGGATTTGGATGTAGAGGTGTATCTAATAGTCGGACAAAAGTTACATTTGTGAAACAAGATCGACAAAATGTTTGCACAGCCATGATTCTGTTGAAGAGAGAAAAGGTTGGGGAATGGGTCATCCGGAAATTTGTTAGGGACCATAATCATCCCATGGTGGTTGACTTTCAAAAGACTCATCGAACACTTGATGAGAAGGATAGGAAAATTCAAGAATTGACAGCAGAATTGCGGGTTAAGAAGCGATTGAGTGCAGCATACCGAGAGCAGCTACGAACTTTCTTGAAGGATGTTGAAGGCCACAGTGAACATATCTCCAAAAAAATCCATTCAGTTTACGAAAATCTTAGGAATCTTGATGCTGAGATGGGAAATCTTTCAAAAAAAGATGGATGA 864 0.3935 MVVTFLGLIPSDCVCMLPQLKIQIHLANSIFVDFEGWFYVAVTFTSQGIYEFCLHPVEYLLQLGPNQVQESGLLRFSFLINMEDQLDGGNRDVETSGDAGTSSFEVHINQEPYEGMSFESEKAARDFYDNYASRAGFMTRVLSSRKSERDGSIISRGFGCRGVSNSRTKVTFVKQDRQNVCTAMILLKREKVGEWVIRKFVRDHNHPMVVDFQKTHRTLDEKDRKIQELTAELRVKKRLSAAYREQLRTFLKDVEGHSEHISKKIHSVYENLRNLDAEMGNLSKKDG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1817 287 Coils Coil 212 246 - -
Dere08g1817 287 Pfam FAR1 DNA-binding domain 126 209 IPR004330 -
Dere08g1817 287 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 81 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1817 Dere-ChrDere08 25710001 25711628 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere08g1817 FAR1 3e-19 CL0274