Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere08g1796 | ATGTCTCAGGACAGTTCAGTCCCTTCTTCGACCTGTTGCTCGAGATCGGATCATTTGGATTCAGCTTCAGCTGAACTCAAGCTTTATCGAGCCTTCATCTTCTCTGTACCCATCTTCTTCACTTTCATCCTGCTCTTTCTGTTCTACGTGTTCTACCTTCGACCACGAAGGGTTGATTGGTCGTCTCTTAGGATGAGGGCATTGACAGAGGATAACAGTGGTATCTCCAGGCCTGAACTGGGCTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATTGTATACAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCAGTATGCCTTCTGGACTACCAACCAGAGGATAGACTTCAACAGATACCTGCATGTGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAATCACAGTACCTGCCCTCTCTGCCGCTTGTCCTTACTAGCTTCTGCTAAATCTTCAACAGGGACATCTAATATACAGAGGCCATCCAGTGATGAAGAAACATCATCTGCACAATTCTGTGAACCGAGATCCATAAGTCATACTGATACCACTGTTGTCCAGAATTGCTCCAGAGATGTTGCAAGCAGCGCCCATGGCATTGATGTTGAAAGAGAAAATGCAGAAAGCAGTTAG | 651 | 0.4516 | MSQDSSVPSSTCCSRSDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRALTEDNSGISRPELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTGTSNIQRPSSDEETSSAQFCEPRSISHTDTTVVQNCSRDVASSAHGIDVERENAESS | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere08g1796 | 216 | PANTHER | OS11G0150450 PROTEIN | 42 | 185 | - | - | |
Dere08g1796 | 216 | FunFam | RING-H2 finger protein ATL7 | 72 | 153 | - | - | |
Dere08g1796 | 216 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 153 | IPR013083 | - | |
Dere08g1796 | 216 | SMART | ring_2 | 106 | 147 | IPR001841 | - | |
Dere08g1796 | 216 | Pfam | Ring finger domain | 105 | 148 | IPR001841 | - | |
Dere08g1796 | 216 | CDD | RING-H2_EL5-like | 105 | 148 | - | - | |
Dere08g1796 | 216 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
Dere08g1796 | 216 | MobiDBLite | consensus disorder prediction | 159 | 185 | - | - | |
Dere08g1796 | 216 | SUPERFAMILY | RING/U-box | 90 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere08g1796 | Dere-ChrDere08 | 25242003 | 25248524 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere08g1796 | 21 | 198 | C3H Transcription Factor Family | AT4G10150 | 54.639 | 1.92e-65 | 200 |